RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 RAI1Q7Z5J4 1906 aaPredicted RBP2.46□□□□□ -2.02
VPS13B-207ENST00000518569 ABCB11O95342 1321 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 PCNTO95613 3336 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 ABCA3Q99758 1704 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 SHANK3Q9BYB0 1731 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 ADGRB2O60241 1585 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 TROQ12816 1431 aaPredicted RBP2.46□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF816-ZNF321PA0A0X1KG74 233 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 SLC22A20A6NK97 555 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 GJE1A6NN92 205 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 FTCDNL1E5RQL4 147 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 H7C2Y5 167 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 PANO1I0J062 215 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 M0QXV9 152 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 PSMD12O00232 456 aaPredicted RBP2.46□□□□□ -2.02
VPS13B-207ENST00000518569 ZBTB5O15062 677 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 CRXO43186 299 aaPredicted RBP2.46□□□□□ -2.02
VPS13B-207ENST00000518569 B4GALT5O43286 388 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 HCRTR1O43613 425 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 CHP2O43745 196 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF861PO60384 105 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 DPM1O60762 260 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 RAMP3O60896 148 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 SUPT3HO75486 399 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 ADAP1O75689 374 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 TRAPPC6AO75865 159 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 DCTN3O75935 186 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 OR2B3O76000 313 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 SNAP29O95721 258 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 MT-ND4P03905 459 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 MMP1P03956 469 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 ISG15P05161 165 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 SCGB1A1P11684 91 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 ABOP16442 354 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF43P17038 809 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 PVALBP20472 110 aaPredicted RBP2.46□□□□□ -2.02
VPS13B-207ENST00000518569 F8A1P23610 371 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 CMA1P23946 247 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 SSTR5P35346 364 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 GABRA4P48169 554 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 GSSP48637 474 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 PRLHRP49683 370 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 PPOXP50336 477 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 TAS2R39P59534 338 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 SLC35B1P78383 322 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 BTN3A2P78410 334 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 TLE4Q04727 773 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 AESQ08117 197 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 KLRB1Q12918 225 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 SELENBP1Q13228 472 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 C1orf61Q13536 156 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 EIF4EBP2Q13542 120 aaPredicted RBP2.46□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF77Q15935 545 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 PGGHGQ32M88 737 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 PPM1LQ5SGD2 360 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 RESP18Q5W5W9 173 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 DUPD1Q68J44 220 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 UQCC3Q6UW78 93 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 IDO2Q6ZQW0 420 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 FAM92BQ6ZTR7 304 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 TMEM179Q6ZVK1 233 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 FAM220AQ7Z4H9 259 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 CMC1Q7Z7K0 106 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 KIR3DL3Q8N743 410 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 ITFG1Q8TB96 612 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 C16orf78Q8WTQ4 265 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 MRPS31Q92665 395 aaKnown RBP2.46□□□□□ -2.02
VPS13B-207ENST00000518569 C12orf43Q96C57 262 aaKnown RBP2.46□□□□□ -2.02
VPS13B-207ENST00000518569 ZHX1-C8orf76Q96EF9 292 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 TMEM101Q96IK0 257 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 ARHGDIGQ99819 225 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 KIFC1Q9BW19 673 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF717Q9BY31 904 aaPredicted RBP2.46□□□□□ -2.02
VPS13B-207ENST00000518569 ACTR3CQ9C0K3 210 aaPredicted RBP2.46□□□□□ -2.02
VPS13B-207ENST00000518569 PCBD2Q9H0N5 130 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 UGT1A7Q9HAW7 530 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 PATZ1Q9HBE1 687 aaKnown RBP2.46□□□□□ -2.02
VPS13B-207ENST00000518569 RHOFQ9HBH0 211 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 FBXO6Q9NRD1 293 aaPredicted RBP2.46□□□□□ -2.02
VPS13B-207ENST00000518569 RMND1Q9NWS8 449 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 GIN1Q9NXP7 522 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 BTNL2Q9UIR0 455 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 COPS3Q9UNS2 423 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 FARSAQ9Y285 508 aaKnown RBP2.46□□□□□ -2.02
VPS13B-207ENST00000518569 SLIT1O75093 1534 aa2.46□□□□□ -2.02
VPS13B-207ENST00000518569 RGPD8O14715 1765 aaPredicted RBP2.46□□□□□ -2.02
VPS13B-207ENST00000518569 ERVK-7P63135 1459 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF318Q5VUA4 2279 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 WDR90Q96KV7 1748 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 RTEL1-TNFRSF6BF6WH68 1400 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 MIA2Q96PC5 1412 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 A0A0J9YXY3 114 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 ZNF233A6NK53 670 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 BHLHE40O14503 412 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 PFDN6O15212 129 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 TGOLN2O43493 480 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 PRKYO43930 277 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 CDC40O60508 579 aaKnown RBP eCLIP2.45□□□□□ -2.02
VPS13B-207ENST00000518569 SLC16A7O60669 478 aa2.45□□□□□ -2.02
VPS13B-207ENST00000518569 ATP5LO75964 103 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms