RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 KRBOX1C9JBD0 128 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 LMO7DNF2Z398 122 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 SIGLEC5O15389 551 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 CHST10O43529 356 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 GPR75O95800 540 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 HLA-AP01891 365 aaKnown RBP4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 C1QCP02747 245 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF37AP17032 561 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 CCKARP32238 428 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 PLA2G5P39877 138 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 DCTP40126 519 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 GLRBP48167 497 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 CDH11P55287 796 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 PAX9P55771 341 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 ADAM8P78325 824 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 HNRNPA0Q13151 305 aaKnown RBP4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 NKPD1Q17RQ9 610 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 DUOXA1Q1HG43 343 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 SPDYE7PQ495Y7 208 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 TMEM52BQ4KMG9 183 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 FAM74A3Q4VXF1 159 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 CROCCQ5TZA2 2017 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 PAQR6Q6TCH4 344 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 BAIAP2L2Q6UXY1 529 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 CLDN19Q8N6F1 224 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF383Q8NA42 475 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC16A11Q8NCK7 471 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR5L2Q8NGL0 311 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR1P1Q8NH06 330 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 SFT2D1Q8WV19 159 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 SSMEM1Q8WWF3 244 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC7A6Q92536 515 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 NARS2Q96I59 477 aaKnown RBP4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 KIRREL1Q96J84 757 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 UHRF2Q96PU4 802 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 PSMG3-AS1Q96PY0 264 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR52B2Q96RD2 323 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 P2RX4Q99571 388 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 TCEAL2Q9H3H9 227 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 CLMPQ9H6B4 373 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 PATZ1Q9HBE1 687 aaKnown RBP4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 FRRS1LQ9P0K9 344 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC2A6Q9UGQ3 507 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC17A4Q9Y2C5 497 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 KLHDC2Q9Y2U9 406 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 CABIN1Q9Y6J0 2220 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 CEP192Q8TEP8 1941 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 RALGAPA1Q6GYQ0 2036 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 TRAV18A0A075B6X5 111 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 GLYATL1P3A0A0U1RQE8 302 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 PRSS51A0A1B0GVH4 220 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 TINCRA0A1B0GVN0 87 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 CIB4A0PJX0 185 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 TMEM150CB9EJG8 249 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF878C9JN71 531 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 CCL24O00175 119 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 HYAL3O43820 417 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 UGT2B11O75310 529 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC25A14O95258 325 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 C1QBP02746 253 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 FGF1P05230 155 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 NGFRP08138 427 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 CELA2BP08218 269 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 METTL15P1P0C7V9 234 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 DUX4L4P0CJ87 422 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 IFNGR2P38484 337 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 RPS19P39019 145 aaKnown RBP4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 SPINT3P49223 89 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 STC1P52823 247 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 AQP5P55064 265 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 RRAS2P62070 204 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC35B1P78383 322 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 PLA2G7Q13093 441 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 SPHARQ15513 63 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 CSRP2Q16527 193 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 ST3GAL2Q16842 350 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF630Q2M218 657 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 PABPC1L2AQ5JQF8 200 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 LGI4Q8N135 537 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 DNAJC22Q8N4W6 341 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR51S1Q8NGJ8 323 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR51F2Q8NH61 342 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 GNPDA2Q8TDQ7 276 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 ADAMTS17Q8TE56 1095 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 PCNPQ8WW12 178 aaKnown RBP4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 TADA1Q96BN2 335 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 UPRTQ96BW1 309 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 RTP4Q96DX8 246 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 LIN37Q96GY3 246 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 IL17FQ96PD4 163 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR8B4Q96RC9 309 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 SORT1Q99523 831 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 GFI1Q99684 422 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 APOL4Q9BPW4 351 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 MCUBQ9NWR8 336 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 RASL12Q9NYN1 266 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 ARMCX1Q9P291 453 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 DHCR7Q9UBM7 475 aaKnown RBP4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 OAZ3Q9UMX2 235 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 AMDHD2Q9Y303 409 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms