RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 LGALS4P56470 323 aa15.23■□□□□ 0.03
HMGCS1-206ENST00000511774 SPIBQ01892 262 aa15.23■□□□□ 0.03
HMGCS1-206ENST00000511774 PRDX4Q13162 271 aa15.23■□□□□ 0.03
HMGCS1-206ENST00000511774 GFOD2Q3B7J2 385 aa15.23■□□□□ 0.03
HMGCS1-206ENST00000511774 ARSJQ5FYB0 599 aaPredicted RBP15.23■□□□□ 0.03
HMGCS1-206ENST00000511774 CYP4Z1Q86W10 505 aa15.23■□□□□ 0.03
HMGCS1-206ENST00000511774 SLC15A3Q8IY34 581 aa15.23■□□□□ 0.03
HMGCS1-206ENST00000511774 ZNF511Q8NB15 262 aa15.23■□□□□ 0.03
HMGCS1-206ENST00000511774 PROKR2Q8NFJ6 384 aa15.23■□□□□ 0.03
HMGCS1-206ENST00000511774 RPS4Y2Q8TD47 263 aa15.23■□□□□ 0.03
HMGCS1-206ENST00000511774 SDSLQ96GA7 329 aa15.23■□□□□ 0.03
HMGCS1-206ENST00000511774 MICU1Q9BPX6 476 aa15.23■□□□□ 0.03
HMGCS1-206ENST00000511774 PCDHGB5Q9Y5G0 923 aa15.23■□□□□ 0.03
HMGCS1-206ENST00000511774 ODF3BA8MYP8 253 aa15.22■□□□□ 0.03
HMGCS1-206ENST00000511774 C3orf84H3BNL1 204 aa15.22■□□□□ 0.03
HMGCS1-206ENST00000511774 DUS4LO95620 317 aaKnown RBP15.22■□□□□ 0.03
HMGCS1-206ENST00000511774 SPARCP09486 303 aa15.22■□□□□ 0.03
HMGCS1-206ENST00000511774 NCK1P16333 377 aa15.22■□□□□ 0.03
HMGCS1-206ENST00000511774 GLRA1P23415 457 aa15.22■□□□□ 0.03
HMGCS1-206ENST00000511774 SLC7A2P52569 658 aa15.22■□□□□ 0.03
HMGCS1-206ENST00000511774 SLC25A1P53007 311 aa15.22■□□□□ 0.03
HMGCS1-206ENST00000511774 DLX6P56179 175 aa15.22■□□□□ 0.03
HMGCS1-206ENST00000511774 LIPEQ05469 1076 aa15.22■□□□□ 0.03
HMGCS1-206ENST00000511774 TAF13Q15543 124 aa15.22■□□□□ 0.03
HMGCS1-206ENST00000511774 SSX2Q16385 188 aa15.22■□□□□ 0.03
HMGCS1-206ENST00000511774 FAM57BQ71RH2 274 aa15.22■□□□□ 0.03
HMGCS1-206ENST00000511774 CD177Q8N6Q3 437 aa15.22■□□□□ 0.03
HMGCS1-206ENST00000511774 FAM86B1Q8N7N1 296 aa15.22■□□□□ 0.03
HMGCS1-206ENST00000511774 OR4M1Q8NGD0 313 aa15.22■□□□□ 0.03
HMGCS1-206ENST00000511774 RTL8AQ9BWD3 113 aa15.22■□□□□ 0.03
HMGCS1-206ENST00000511774 TSSC4Q9Y5U2 329 aaPredicted RBP15.22■□□□□ 0.03
HMGCS1-206ENST00000511774 DHRS12A0PJE2 317 aa15.21■□□□□ 0.03
HMGCS1-206ENST00000511774 BBIP1A8MTZ0 92 aa15.21■□□□□ 0.03
HMGCS1-206ENST00000511774 ZNF878C9JN71 531 aa15.21■□□□□ 0.03
HMGCS1-206ENST00000511774 CHRM2P08172 466 aa15.21■□□□□ 0.03
HMGCS1-206ENST00000511774 RPL31P62899 125 aaKnown RBP15.21■□□□□ 0.03
HMGCS1-206ENST00000511774 IL5RAQ01344 420 aa15.21■□□□□ 0.03
HMGCS1-206ENST00000511774 DMRTC1Q5HYR2 192 aa15.21■□□□□ 0.03
HMGCS1-206ENST00000511774 METTL21CQ5VZV1 264 aa15.21■□□□□ 0.03
HMGCS1-206ENST00000511774 OR4C15Q8NGM1 316 aa15.21■□□□□ 0.03
HMGCS1-206ENST00000511774 KRTAP17-1Q9BYP8 105 aa15.21■□□□□ 0.03
HMGCS1-206ENST00000511774 DNAJC27Q9NZQ0 273 aa15.21■□□□□ 0.03
HMGCS1-206ENST00000511774 STARD9Q9P2P6 4700 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 MEX3AA1L020 520 aaKnown RBP15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 TMEM210A6NLX4 147 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 ANXA2P2A6NMY6 339 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 ZNF593O00488 134 aaPredicted RBP15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 NME4O00746 187 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 EDF1O60869 148 aaKnown RBP15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 GLCEO94923 617 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 GYPBP06028 91 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 RHCEP18577 417 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 CEBPDP49716 269 aaPredicted RBP15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 ENTPD1P49961 510 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 CAPZA1P52907 286 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 ZNF121P58317 390 aaPredicted RBP15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 KCTD8Q6ZWB6 473 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 MRPL41Q8IXM3 137 aaKnown RBP15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 DYDC1Q8WWB3 177 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 RCN3Q96D15 328 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 RNF170Q96K19 258 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 LYZL4Q96KX0 146 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 AMELYQ99218 206 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 SAR1AQ9NR31 198 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 ABCB10Q9NRK6 738 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 GID8Q9NWU2 228 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 MPC1Q9Y5U8 109 aa15.2■□□□□ 0.02
HMGCS1-206ENST00000511774 IDH3BO43837 385 aa15.19■□□□□ 0.02
HMGCS1-206ENST00000511774 ARG1P05089 322 aa15.19■□□□□ 0.02
HMGCS1-206ENST00000511774 NHLRC4P0CG21 123 aaPredicted RBP15.19■□□□□ 0.02
HMGCS1-206ENST00000511774 GSSP48637 474 aa15.19■□□□□ 0.02
HMGCS1-206ENST00000511774 CASC10Q5T4H9 136 aa15.19■□□□□ 0.02
HMGCS1-206ENST00000511774 CSNK2A3Q8NEV1 391 aa15.19■□□□□ 0.02
HMGCS1-206ENST00000511774 CHID1Q9BWS9 393 aa15.19■□□□□ 0.02
HMGCS1-206ENST00000511774 EGLN3Q9H6Z9 239 aa15.19■□□□□ 0.02
HMGCS1-206ENST00000511774 BRD7Q9NPI1 651 aa15.19■□□□□ 0.02
HMGCS1-206ENST00000511774 PITPNC1Q9UKF7 332 aa15.19■□□□□ 0.02
HMGCS1-206ENST00000511774 LRP12Q9Y561 859 aa15.19■□□□□ 0.02
HMGCS1-206ENST00000511774 MTRF1O75570 445 aaKnown RBP15.18■□□□□ 0.02
HMGCS1-206ENST00000511774 CLUP10909 449 aa15.18■□□□□ 0.02
HMGCS1-206ENST00000511774 PAICSP22234 425 aaKnown RBP15.18■□□□□ 0.02
HMGCS1-206ENST00000511774 GPM6AP51674 278 aa15.18■□□□□ 0.02
HMGCS1-206ENST00000511774 SF3A3Q12874 501 aaKnown RBP eCLIP15.18■□□□□ 0.025e-6■□□□□ 8
HMGCS1-206ENST00000511774 ZNF626Q68DY1 528 aa15.18■□□□□ 0.02
HMGCS1-206ENST00000511774 THAP5Q7Z6K1 395 aa15.18■□□□□ 0.02
HMGCS1-206ENST00000511774 CENPVQ7Z7K6 275 aaPredicted RBP15.18■□□□□ 0.02
HMGCS1-206ENST00000511774 SLC37A3Q8NCC5 494 aa15.18■□□□□ 0.02
HMGCS1-206ENST00000511774 PIGCQ92535 297 aa15.18■□□□□ 0.02
HMGCS1-206ENST00000511774 MALSU1Q96EH3 234 aa15.18■□□□□ 0.02
HMGCS1-206ENST00000511774 ZNF488Q96MN9 340 aa15.18■□□□□ 0.02
HMGCS1-206ENST00000511774 OR51I2Q9H344 312 aa15.18■□□□□ 0.02
HMGCS1-206ENST00000511774 USE1Q9NZ43 259 aa15.18■□□□□ 0.02
HMGCS1-206ENST00000511774 FAM32AQ9Y421 112 aaKnown RBP15.18■□□□□ 0.02
HMGCS1-206ENST00000511774 TBL2Q9Y4P3 447 aaKnown RBP15.18■□□□□ 0.02
HMGCS1-206ENST00000511774 SH2D7A6NKC9 451 aaPredicted RBP15.17■□□□□ 0.02
HMGCS1-206ENST00000511774 RFPL4AA6NLU0 287 aa15.17■□□□□ 0.02
HMGCS1-206ENST00000511774 C17orf98A8MV24 154 aa15.17■□□□□ 0.02
HMGCS1-206ENST00000511774 FAM90A22PA8MWA6 464 aa15.17■□□□□ 0.02
HMGCS1-206ENST00000511774 RFPL4AL1F8VTS6 287 aa15.17■□□□□ 0.02
HMGCS1-206ENST00000511774 GSTA4O15217 222 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms