RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 NKPD1Q17RQ9 610 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 HYAL4Q2M3T9 481 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 WIPI1Q5MNZ9 446 aaPredicted RBP14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 TMEM251Q8N6I4 163 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 KCNG3Q8TAE7 436 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 OR51E1Q8TCB6 317 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 NUDCD2Q8WVJ2 157 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 MRGPRFQ96AM1 343 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 CMBLQ96DG6 245 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 CST11Q9H112 138 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 PTPRQQ9UMZ3 2332 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 ANKRD11Q6UB99 2663 aaPredicted RBP14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 TMEM8BA6NDV4 472 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 SPDEFO95238 335 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 IFNA6P05013 189 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 HRH1P35367 487 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 B3GALT5-AS1P59052 145 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 PPP1R1AQ13522 171 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 ZNF169Q14929 603 aaPredicted RBP14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 PNLIPRP3Q17RR3 467 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 C17orf107Q6ZR85 190 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 DOK3Q7L591 496 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 CD163Q86VB7 1156 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 ANGPTL5Q86XS5 388 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 OR5AS1Q8N127 324 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 SHARPINQ9H0F6 387 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 LPAR5Q9H1C0 372 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 RASL12Q9NYN1 266 aa14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 MRPS28Q9Y2Q9 187 aaKnown RBP14.07□□□□□ -0.16
SQSTM1-213ENST00000510187 CHD8Q9HCK8 2581 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 AQP7P3A6NL99 342 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 SSX5O60225 188 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 DUS4LO95620 317 aaKnown RBP14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 RLN2P04090 185 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 CSN2P05814 226 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 HPNP05981 417 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 CELA3AP09093 270 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 GNB3P16520 340 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 CTSSP25774 331 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 SFTPDP35247 375 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 CBX5P45973 191 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 ZNF121P58317 390 aaPredicted RBP14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 VAX1Q5SQQ9 334 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 ACOT7LQ6ZUV0 252 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 NAA40Q86UY6 237 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 HOGA1Q86XE5 327 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 ARRDC1Q8N5I2 433 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 GVQW1Q8N7I0 195 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 PXT1Q8NFP0 134 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 OR8B12Q8NGG6 310 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 SELENOIQ9C0D9 397 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 SEC61A2Q9H9S3 476 aa14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 PNRC2Q9NPJ4 139 aaKnown RBP14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 ZNF230Q9UIE0 474 aaPredicted RBP14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 TNRC6AQ8NDV7 1962 aaKnown RBP14.06□□□□□ -0.16
SQSTM1-213ENST00000510187 POM121CA8CG34 1229 aa14.05□□□□□ -0.16
SQSTM1-213ENST00000510187 CEACAM18A8MTB9 384 aa14.05□□□□□ -0.16
SQSTM1-213ENST00000510187 ZNF43P17038 809 aa14.05□□□□□ -0.16
SQSTM1-213ENST00000510187 SLC35A1P78382 337 aa14.05□□□□□ -0.16
SQSTM1-213ENST00000510187 IL13RA1P78552 427 aa14.05□□□□□ -0.16
SQSTM1-213ENST00000510187 PMP22Q01453 160 aa14.05□□□□□ -0.16
SQSTM1-213ENST00000510187 TMEM176BQ3YBM2 270 aaPredicted RBP14.05□□□□□ -0.16
SQSTM1-213ENST00000510187 OR52W1Q6IF63 320 aa14.05□□□□□ -0.16
SQSTM1-213ENST00000510187 GLIPR1L1Q6UWM5 242 aa14.05□□□□□ -0.16
SQSTM1-213ENST00000510187 Q6ZS92 163 aa14.05□□□□□ -0.16
SQSTM1-213ENST00000510187 ABHD12BQ7Z5M8 362 aaPredicted RBP14.05□□□□□ -0.16
SQSTM1-213ENST00000510187 ZNF101Q8IZC7 436 aa14.05□□□□□ -0.16
SQSTM1-213ENST00000510187 C1orf147Q96MC9 270 aaPredicted RBP14.05□□□□□ -0.16
SQSTM1-213ENST00000510187 OR5B2Q96R09 309 aa14.05□□□□□ -0.16
SQSTM1-213ENST00000510187 TP53TG5Q9Y2B4 290 aa14.05□□□□□ -0.16
SQSTM1-213ENST00000510187 KCNK7Q9Y2U2 307 aa14.05□□□□□ -0.16
SQSTM1-213ENST00000510187 RNF222A6NCQ9 220 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 OR2AT4A6NND4 320 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 ZNF726A6NNF4 738 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 CDC14BO60729 498 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 HIST1H1DP16402 221 aaKnown RBP14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 CX3CR1P49238 355 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 LSM6P62312 80 aaKnown RBP14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 RAC1P63000 192 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 RBMXL3Q8N7X1 1067 aaKnown RBP14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 OR56B1Q8NGI3 324 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 OR4K15Q8NH41 348 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 SSC4DQ8WTU2 575 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 PPP1R1CQ8WVI7 109 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 ST8SIA4Q92187 359 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 FBXW5Q969U6 566 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 VRK1Q99986 396 aaPredicted RBP14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 GPR84Q9NQS5 396 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 GHRLQ9UBU3 117 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 NCKAP5O14513 1909 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 A0A0B4J2A0 478 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 A0A1W2PNR3 127 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 DBX1A6NMT0 343 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 GJE1A6NN92 205 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 PRKXP51817 358 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 GFRA1P56159 465 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 SLC10A1Q14973 349 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 TUSC1Q2TAM9 212 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 RNFT1Q5M7Z0 435 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 MOB3CQ70IA8 216 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms