RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 FTMTQ8N4E7 242 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 YIPF7Q8N8F6 280 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 OR1J1Q8NGS3 322 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 SYNPRQ8TBG9 265 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 PIGTQ969N2 578 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 MRPL24Q96A35 216 aaKnown RBP4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 C10orf35Q96D05 121 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZNF649Q9BS31 505 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 SLC22A4Q9H015 551 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 PLEKHF2Q9H8W4 249 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 ABCB9Q9NP78 766 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 ISYNA1Q9NPH2 558 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 CYSLTR2Q9NS75 346 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 CA10Q9NS85 328 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 AASSQ9UDR5 926 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 NUFIP1Q9UHK0 495 aaKnown RBP4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 MRM2Q9UI43 246 aaKnown RBP4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 GTF2A1LQ9UNN4 478 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 NOP16Q9Y3C1 178 aaKnown RBP4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 LRP12Q9Y561 859 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 R4GMQ9 66 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 RAI1Q7Z5J4 1906 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 APCP25054 2843 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 USF3Q68DE3 2245 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 TACC2O95359 2948 aa4.69□□□□□ -1.66
HMGB1P44-201ENST00000508597 FAM90A18PA6NE21 464 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 FAM90A16PA6NEW6 464 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 TRIM64A6NGJ6 449 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 FAM90A9PA6NNJ1 464 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 FAM90A5PA8MXJ8 464 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 E7EQL1 145 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 PTGES3LE9PB15 166 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 LOC110117498-PIK3R3F6TDL0 507 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 MYL12BO14950 172 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 SPRY2O43597 315 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 XPNPEP2O43895 674 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 SRSF10O75494 262 aaKnown RBP4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 MTRF1O75570 445 aaKnown RBP4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 TNFAIP8O95379 198 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 ISG15P05161 165 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 ERCC1P07992 297 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 HTR1AP08908 422 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 FAM90A15PP0C7V4 464 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 FAM90A14PP0C7W9 464 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 UBCP0CG48 685 aaKnown RBP4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 LIMS3P0CW19 117 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 LIMS4P0CW20 117 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 TMEM225BP0DP42 221 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 PSKH1P11801 424 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 CCL2P13500 99 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 KITLGP21583 273 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 EEF1B2P24534 225 aaKnown RBP4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 THBS4P35443 961 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 WNT5AP41221 380 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 FABP6P51161 128 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 PRKXP51817 358 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 WNT4P56705 351 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 KLF3P57682 345 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZNF121P58317 390 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 SUMO2P61956 95 aaKnown RBP4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 SNRPD2P62316 118 aaKnown RBP4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 MZT1Q08AG7 82 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 ACSM1Q08AH1 577 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 GPR50Q13585 617 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 IRF3Q14653 427 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 ADIPOQQ15848 244 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 TIGD6Q17RP2 521 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 KCTD21Q4G0X4 260 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 ATPAF1Q5TC12 328 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 TMEM244Q5VVB8 128 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 OTPQ5XKR4 325 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 FAM90A2PQ658T7 463 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 RPL22L1Q6P5R6 122 aaKnown RBP4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 KRT74Q7RTS7 529 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 SSX6Q7RTT6 188 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 PRSS45Q7RTY3 260 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 LHFPL3Q86UP9 236 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 KLBQ86Z14 1044 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 ELMOD2Q8IZ81 293 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZNF101Q8IZC7 436 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 MUC15Q8N387 334 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 PAQR4Q8N4S7 273 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 NANOGP1Q8N7R0 232 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 C11orf44Q8N8P7 122 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 CSNK2A3Q8NEV1 391 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 KBTBD8Q8NFY9 601 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 LILRB1Q8NHL6 650 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 SLC25A40Q8TBP6 338 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 KLF14Q8TD94 323 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 SMAP2Q8WU79 429 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 SLC7A6Q92536 515 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 THRSPQ92748 146 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 HAVCR1Q96D42 359 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 PGAM5Q96HS1 289 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 C4orf36Q96KX1 117 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 NR1H4Q96RI1 486 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 SIGLEC11Q96RL6 698 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 PRR25Q96S07 402 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 AMELYQ99218 206 aa4.68□□□□□ -1.66
HMGB1P44-201ENST00000508597 TBX5Q99593 518 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms