RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 METTL17Q9H7H0 456 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-210ENST00000506941 PAK1IP1Q9NWT1 392 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-210ENST00000506941 RNF7Q9UBF6 113 aa15.25■□□□□ 0.03
NPHP4-210ENST00000506941 TMEM210A6NLX4 147 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 ZFPL1O95159 310 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 LALBAP00709 142 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 IRF2P14316 349 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 EGR1P18146 543 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 MDH2P40926 338 aaKnown RBP15.24■□□□□ 0.03
NPHP4-210ENST00000506941 CDH15P55291 814 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 MRPL28Q13084 256 aaKnown RBP15.24■□□□□ 0.03
NPHP4-210ENST00000506941 DOC2BQ14184 412 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 TMEM155Q4W5P6 130 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 WDR82Q6UXN9 313 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 TMPRSS11AQ6ZMR5 421 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 KCTD8Q6ZWB6 473 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 C1orf87Q8N0U7 546 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 STX19Q8N4C7 294 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 GCSAMQ8N6F7 178 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 SCCPDHQ8NBX0 429 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 OR52N1Q8NH53 320 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 RPS4Y2Q8TD47 263 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 RPL3LQ92901 407 aaKnown RBP15.24■□□□□ 0.03
NPHP4-210ENST00000506941 PDCD1LG2Q9BQ51 273 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 PLEKHA1Q9HB21 404 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 TMEM165Q9HC07 324 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 UBAP1Q9NZ09 502 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 RAB26Q9ULW5 256 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 SIRT4Q9Y6E7 314 aaPredicted RBP15.24■□□□□ 0.03
NPHP4-210ENST00000506941 MXRA5Q9NR99 2828 aa15.24■□□□□ 0.03
NPHP4-210ENST00000506941 PPIAL4EA0A075B759 164 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 hCG_1807616A0A1W2PRN6 198 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 ZNF732B4DXR9 585 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 PPIAL4DF5H284 164 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 C3orf80F5H4A9 247 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 CDIPTO14735 213 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 RRP9O43818 475 aaKnown RBP15.23■□□□□ 0.03
NPHP4-210ENST00000506941 LHBP01229 141 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 PPIAL4FP0DN26 164 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 CD80P33681 288 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 GNG3P63215 75 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 ZNF676Q8N7Q3 588 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 BOLLQ8N9W6 283 aaKnown RBP15.23■□□□□ 0.03
NPHP4-210ENST00000506941 LINC01356Q8N9X3 169 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 CCDC54Q8NEL0 328 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 OR5A2Q8NGI9 324 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 LRRC29Q8WV35 223 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 GATAD2BQ8WXI9 593 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 ADAT3Q96EY9 351 aaPredicted RBP15.23■□□□□ 0.03
NPHP4-210ENST00000506941 CNBD2Q96M20 576 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 HIST1H2AAQ96QV6 131 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 OR51I2Q9H344 312 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 HHLA2Q9UM44 414 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 PPIAL4AQ9Y536 164 aa15.23■□□□□ 0.03
NPHP4-210ENST00000506941 TRBV2A0A0J9YWF9 115 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 ANKRD61A6NGH8 418 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 OR5B21A6NL26 309 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 TMEM212A6NML5 194 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 CEACAM18A8MTB9 384 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 PTGES3LE9PB15 166 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 F5H0A9 414 aaPredicted RBP15.22■□□□□ 0.03
NPHP4-210ENST00000506941 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.22■□□□□ 0.03
NPHP4-210ENST00000506941 FSTL3O95633 263 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 CDK1P06493 297 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 CCDC159P0C7I6 412 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 CDK5R1Q15078 307 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 UBE2V2Q15819 145 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 ZNF404Q494X3 552 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 CCDC58Q4VC31 144 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 MUC20Q8N307 709 aaPredicted RBP15.22■□□□□ 0.03
NPHP4-210ENST00000506941 SPICQ8N5J4 248 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 OR5AK2Q8NH90 309 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 HAVCR2Q8TDQ0 301 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 RGP1Q92546 391 aaPredicted RBP15.22■□□□□ 0.03
NPHP4-210ENST00000506941 RAB39BQ96DA2 213 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 ZNF184Q99676 751 aaPredicted RBP15.22■□□□□ 0.03
NPHP4-210ENST00000506941 TMEM246Q9BRR3 403 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 CHST5Q9GZS9 411 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 LPAR2Q9HBW0 351 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 YAE1D1Q9NRH1 226 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 CHCHD3Q9NX63 227 aaKnown RBP15.22■□□□□ 0.03
NPHP4-210ENST00000506941 BABAM2Q9NXR7 383 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 ERVK-18Q9QC07 812 aa15.22■□□□□ 0.03
NPHP4-210ENST00000506941 PQLC2LA1A4F0 135 aa15.21■□□□□ 0.03
NPHP4-210ENST00000506941 INAFM1C9JVW0 142 aa15.21■□□□□ 0.03
NPHP4-210ENST00000506941 TGFAP01135 160 aa15.21■□□□□ 0.03
NPHP4-210ENST00000506941 ZNF12P17014 697 aa15.21■□□□□ 0.03
NPHP4-210ENST00000506941 SEC61A1P61619 476 aaKnown RBP15.21■□□□□ 0.03
NPHP4-210ENST00000506941 SLC35A2P78381 396 aa15.21■□□□□ 0.03
NPHP4-210ENST00000506941 MED21Q13503 144 aa15.21■□□□□ 0.03
NPHP4-210ENST00000506941 SFRP4Q6FHJ7 346 aaPredicted RBP15.21■□□□□ 0.03
NPHP4-210ENST00000506941 RPL22L1Q6P5R6 122 aaKnown RBP15.21■□□□□ 0.03
NPHP4-210ENST00000506941 DEFB108BQ8NET1 73 aa15.21■□□□□ 0.03
NPHP4-210ENST00000506941 OR13C3Q8NGS6 347 aa15.21■□□□□ 0.03
NPHP4-210ENST00000506941 FGGYQ96C11 551 aa15.21■□□□□ 0.03
NPHP4-210ENST00000506941 PATZ1Q9HBE1 687 aaKnown RBP15.21■□□□□ 0.03
NPHP4-210ENST00000506941 A8MV72 311 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-210ENST00000506941 B4DSR2 109 aa15.2■□□□□ 0.02
NPHP4-210ENST00000506941 LGALS8O00214 317 aa15.2■□□□□ 0.02
NPHP4-210ENST00000506941 OGG1O15527 345 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms