RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 BLVRBP30043 206 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-208ENST00000504387 APLNRP35414 380 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 SNCAP37840 140 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 SLC25A1P53007 311 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 ERVFRD-1P60508 538 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 ZNF239Q16600 458 aaKnown RBP6.75□□□□□ -1.33
NEDD9-208ENST00000504387 CHRFAM7AQ494W8 412 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 ZNF385CQ66K41 422 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-208ENST00000504387 FAM166AQ6J272 317 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 ZNF880Q6PDB4 577 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 C1QL2Q7Z5L3 287 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 ZDHHC22Q8N966 263 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 LRRC75AQ8NAA5 344 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 OR5L1Q8NGL2 311 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 FNDC9Q8TBE3 224 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 Q8WTZ3 238 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 LMF2Q9BU23 707 aaKnown RBP6.75□□□□□ -1.33
NEDD9-208ENST00000504387 RNF122Q9H9V4 155 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 MRPS28Q9Y2Q9 187 aaKnown RBP6.75□□□□□ -1.33
NEDD9-208ENST00000504387 A0A087WZY1 265 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 CCDC85CA6NKD9 419 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 UTS2O95399 124 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 HEXBP07686 556 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 FOSL2P15408 326 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 POU3F1Q03052 451 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-208ENST00000504387 PRTGQ2VWP7 1150 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 OGFOD3Q6PK18 319 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 C6orf201Q7Z4U5 140 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 HOGA1Q86XE5 327 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 CATSPERDQ86XM0 798 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 STX12Q86Y82 276 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 TMEM156Q8N614 296 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 OR1J1Q8NGS3 322 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 OR52N5Q8NH56 324 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 RPS4Y2Q8TD47 263 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 ZNF2Q9BSG1 426 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-208ENST00000504387 SLCO5A1Q9H2Y9 848 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 C19orf12Q9NSK7 152 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 GPR132Q9UNW8 380 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 PRRC2CQ9Y520 2896 aaKnown RBP6.74□□□□□ -1.33
NEDD9-208ENST00000504387 C5orf63A6NC05 138 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 NPIPB9F8W1W9 429 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 PHYHO14832 338 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 TCAPO15273 167 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 CST7O76096 145 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 F10P00742 488 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 CST4P01036 141 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 SLC35E2P0CK97 266 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 EN2P19622 333 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-208ENST00000504387 DDTP30046 118 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 PTGER4P35408 488 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 TMEM50BP56557 158 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 LSM6P62312 80 aaKnown RBP6.74□□□□□ -1.33
NEDD9-208ENST00000504387 RUNX1Q01196 453 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 GLO1Q04760 184 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 KIR2DS3Q14952 304 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 C9orf50Q5SZB4 431 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 GGNBP1Q5YKI7 109 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 LYZL2Q7Z4W2 148 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-208ENST00000504387 GTF3AQ92664 365 aaKnown RBP6.74□□□□□ -1.33
NEDD9-208ENST00000504387 PIGTQ969N2 578 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 NTNG2Q96CW9 530 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 RAB39BQ96DA2 213 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 SAT2Q96F10 170 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-208ENST00000504387 BMFQ96LC9 184 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 GNRHR2Q96P88 292 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 PRRX2Q99811 253 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 MESP1Q9BRJ9 268 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 TMEM59Q9BXS4 323 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 VN1R1Q9GZP7 353 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 PRDM13Q9H4Q3 707 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 FAM212BQ9NTI7 297 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-208ENST00000504387 ZNF407Q9C0G0 2248 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 FAM157AC9JC47 383 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 H3BQ15 152 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 HIST1H2BKO60814 126 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 TNFP01375 233 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 HIST1H2BJP06899 126 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 LINC00271P0C7V0 271 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 PGA4P0DJD7 388 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 PGA5P0DJD9 388 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 HIST1H2BOP23527 126 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 HIST1H2BBP33778 126 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 MLF1P58340 268 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 HIST1H2BDP58876 126 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 HIST1H2BCP62807 126 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 NAAAQ02083 359 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 ZNF117Q03924 483 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 COL19A1Q14993 1142 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 HIST2H2BEQ16778 126 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-208ENST00000504387 KLHL24Q6TFL4 600 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 MYPOPQ86VE0 399 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-208ENST00000504387 HIST1H2BHQ93079 126 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 TSLPQ969D9 159 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 ZNF775Q96BV0 537 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-208ENST00000504387 CTHRC1Q96CG8 243 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 HIST1H2BNQ99877 126 aa6.74□□□□□ -1.33
NEDD9-208ENST00000504387 HIST1H2BMQ99879 126 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms