RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 CYGBQ8WWM9 190 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 TAF15Q92804 592 aaKnown RBP eCLIP11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 PPP1R14AQ96A00 147 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 OR8B4Q96RC9 309 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 PAPOLGQ9BWT3 736 aaKnown RBP11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 WDR13Q9H1Z4 485 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 ZMAT3Q9HA38 289 aaKnown RBP11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 ADGRL4Q9HBW9 690 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 TRIM36Q9NQ86 728 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 ERVK-18Q9QC07 812 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 ZNF391Q9UJN7 358 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 LAMP5Q9UJQ1 280 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 MPC1Q9Y5U8 109 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 CENPVL3A0A0U1RRI6 287 aa11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 hCG_1807616A0A1W2PRN6 198 aa11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 ACOD1A6NK06 481 aa11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 ZNF850A8MQ14 1090 aa11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 DLGAP1O14490 977 aa11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 DVL1O14640 695 aa11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 MRPL3P09001 348 aaKnown RBP11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 SELLP14151 372 aa11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 BLMHQ13867 455 aa11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 DEFB112Q30KQ8 113 aa11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 RUSC1-AS1Q66K80 236 aa11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 ZNF679Q8IYX0 411 aa11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 FAM216BQ8N7L0 139 aa11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 SCCPDHQ8NBX0 429 aa11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 OR10Z1Q8NGY1 313 aa11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 RPL3LQ92901 407 aaKnown RBP11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 GCDHQ92947 438 aaPredicted RBP11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 C12orf43Q96C57 262 aaKnown RBP11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 TECTBQ96PL2 329 aa11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 MS4A7Q9GZW8 240 aaPredicted RBP11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 HAO2Q9NYQ3 351 aa11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 NUFIP1Q9UHK0 495 aaKnown RBP11.55□□□□□ -0.56
PDLIM7-211ENST00000504318 TMEM210A6NLX4 147 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 HAX1O00165 279 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 TTRP02766 147 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 TFF1P04155 84 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 LIPFP07098 398 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 POLR2IP36954 125 aaKnown RBP11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 RPS7P62081 194 aaKnown RBP11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 ADARB1P78563 741 aaKnown RBP11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 IL5RAQ01344 420 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 BAMBIQ13145 260 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 NXNL2Q5VZ03 156 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 CD276Q5ZPR3 534 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 ZNF788Q6ZQV5 615 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 BTN2A1Q7KYR7 527 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 MEPCEQ7L2J0 689 aaKnown RBP11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 ANGPTL6Q8NI99 470 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 C8orf46Q8TAG6 207 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 TMEM163Q8TC26 289 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 RNF166Q96A37 237 aaPredicted RBP11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 WDFY2Q96P53 400 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 CCL13Q99616 98 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 TTTY10Q9BZA0 68 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 PBOV1Q9GZY1 135 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 OR51I2Q9H344 312 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 KRT84Q9NSB2 600 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 RPUSD1Q9UJJ7 312 aaKnown RBP11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 ZNF222Q9UK12 451 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 MGAM2Q2M2H8 2515 aa11.54□□□□□ -0.56
PDLIM7-211ENST00000504318 A0A1B0GTI1 187 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 TMEM269A0A1B0GVZ9 245 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 P2RY10O00398 339 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 TMPRSS2O15393 492 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 MAGEB4O15481 346 aaPredicted RBP11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 ZNF254O75437 659 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 RHBDL1O75783 438 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 BPIFB3P59826 476 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 MICBQ29980 383 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 ZNF684Q5T5D7 378 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 LCN1P1Q5VSP4 162 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 TMEM42Q69YG0 159 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 Q6YL49 198 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 SSX6Q7RTT6 188 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 KRT77Q7Z794 578 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 TCEANCQ8N8B7 351 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 SETD9Q8NE22 299 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 PIGCQ92535 297 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 ITFG2Q969R8 447 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 GAFA1Q96PS6 74 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 CNN2Q99439 309 aaKnown RBP11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 MICU1Q9BPX6 476 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 RTL8AQ9BWD3 113 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 GABARAPL3Q9BY60 117 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 YTHDF1Q9BYJ9 559 aaKnown RBP11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 ZNF696Q9H7X3 374 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 ABCB9Q9NP78 766 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 MRM2Q9UI43 246 aaKnown RBP11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 MYRFQ9Y2G1 1151 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 PKD1L1Q8TDX9 2849 aa11.53□□□□□ -0.56
PDLIM7-211ENST00000504318 ZNF816-ZNF321PA0A0X1KG74 233 aa11.52□□□□□ -0.57
PDLIM7-211ENST00000504318 ANXA2P2A6NMY6 339 aa11.52□□□□□ -0.57
PDLIM7-211ENST00000504318 SLC16A6O15403 523 aa11.52□□□□□ -0.57
PDLIM7-211ENST00000504318 TOX4O94842 621 aa11.52□□□□□ -0.57
PDLIM7-211ENST00000504318 ECDO95905 644 aaPredicted RBP11.52□□□□□ -0.57
PDLIM7-211ENST00000504318 GNALP38405 381 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms