RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 IL18R1Q13478 541 aa9.79□□□□□ -0.84
LSM6-204ENST00000504181 SNAPC1Q16533 368 aa9.79□□□□□ -0.84
LSM6-204ENST00000504181 PTCHD4Q6ZW05 846 aa9.79□□□□□ -0.84
LSM6-204ENST00000504181 COMMD1Q8N668 190 aa9.79□□□□□ -0.84
LSM6-204ENST00000504181 CYB561A3Q8NBI2 242 aa9.79□□□□□ -0.84
LSM6-204ENST00000504181 SPTSSAQ969W0 71 aa9.79□□□□□ -0.84
LSM6-204ENST00000504181 SDSLQ96GA7 329 aa9.79□□□□□ -0.84
LSM6-204ENST00000504181 PAPOLGQ9BWT3 736 aaKnown RBP9.79□□□□□ -0.84
LSM6-204ENST00000504181 C1orf21Q9H246 121 aa9.79□□□□□ -0.84
LSM6-204ENST00000504181 SP140LQ9H930 580 aa9.79□□□□□ -0.84
LSM6-204ENST00000504181 NMNAT1Q9HAN9 279 aaPredicted RBP9.79□□□□□ -0.84
LSM6-204ENST00000504181 SDR39U1Q9NRG7 319 aaPredicted RBP9.79□□□□□ -0.84
LSM6-204ENST00000504181 CORO2BQ9UQ03 480 aa9.79□□□□□ -0.84
LSM6-204ENST00000504181 SH3GLB1Q9Y371 365 aa9.79□□□□□ -0.84
LSM6-204ENST00000504181 SIRT4Q9Y6E7 314 aaPredicted RBP9.79□□□□□ -0.84
LSM6-204ENST00000504181 SLC22A2O15244 555 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 PTP4A3O75365 173 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 DEDDO75618 318 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 BRS3P32247 399 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 DDOSTP39656 456 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 POU3F4P49335 361 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 ACTA2P62736 377 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 ACTG2P63267 376 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 ACTC1P68032 377 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 ACTA1P68133 377 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 KRT72Q14CN4 511 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 CYP51A1Q16850 503 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 PAGE3Q5JUK9 113 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 LCN8Q6JVE9 175 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 KCTD8Q6ZWB6 473 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 THAP5Q7Z6K1 395 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 ZNF429Q86V71 674 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 CALHM1Q8IU99 346 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 NRMQ8IXM6 262 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 KIRREL3Q8IZU9 778 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 ST6GALNAC6Q969X2 333 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 MICU1Q9BPX6 476 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 RTL8AQ9BWD3 113 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 OPA3Q9H6K4 179 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 RETNQ9HD89 108 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 C19orf73Q9NVV2 129 aa9.78□□□□□ -0.84
LSM6-204ENST00000504181 TRBV5-3A0A0A0MS03 114 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 ANXA2P2A6NMY6 339 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 H3BSH0 61 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 M0QZK8 103 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 TBX1O43435 398 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 SAP30O75446 220 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 ZNF823P16415 610 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 CNTFRP26992 372 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 MTNR1BP49286 362 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 SLC7A2P52569 658 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 FAM3AP98173 230 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 FHL3Q13643 280 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 NFYCQ13952 458 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 HAGHQ16775 308 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 ANKDD1AQ495B1 522 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 CBLL1Q75N03 491 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 CCDC80Q76M96 950 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 SLC16A9Q7RTY1 509 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 PATL1Q86TB9 770 aaKnown RBP9.77□□□□□ -0.85
LSM6-204ENST00000504181 DRAM1Q8N682 238 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 CD177Q8N6Q3 437 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 FAM110AQ9BQ89 295 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 POLR2J2Q9GZM3 115 aaKnown RBP9.77□□□□□ -0.85
LSM6-204ENST00000504181 POLR2J3Q9H1A7 115 aaKnown RBP9.77□□□□□ -0.85
LSM6-204ENST00000504181 KIAA1456Q9P272 454 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 CYB5R1Q9UHQ9 305 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 A4GNTQ9UNA3 340 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 RHBDD3Q9Y3P4 386 aa9.77□□□□□ -0.85
LSM6-204ENST00000504181 IGHV2-26A0A0B4J1V2 119 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 CCRL2O00421 344 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 XRCC2O43543 280 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 ZNF728P0DKX0 622 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 KITP10721 976 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 HTR1DP28221 377 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 CRABP1P29762 137 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 CDKN2AP42771 156 aaKnown RBP9.76□□□□□ -0.85
LSM6-204ENST00000504181 GPR4P46093 362 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 OR1E2P47887 323 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 PRKXP51817 358 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 CRYBA2P53672 197 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 TEX38Q6PEX7 206 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 DNM1P34Q6PK57 102 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 DRAM2Q6UX65 266 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 IFT20Q8IY31 132 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 OR11H1Q8NG94 326 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 SRA1Q9HD15 236 aaKnown RBP9.76□□□□□ -0.85
LSM6-204ENST00000504181 PAPOLBQ9NRJ5 636 aaKnown RBP9.76□□□□□ -0.85
LSM6-204ENST00000504181 MOB4Q9Y3A3 225 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 GMEB1Q9Y692 573 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 HSPE1-MOB4S4R3N1 261 aa9.76□□□□□ -0.85
LSM6-204ENST00000504181 RFPL4AA6NLU0 287 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 TMEM210A6NLX4 147 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 TRPC5OSA6NMA1 111 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 RFPL4AL1F8VTS6 287 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 SLC1A7O00341 560 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 CDC42EP2O14613 210 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 UBDO15205 165 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 RBP4P02753 201 aa9.75□□□□□ -0.85
LSM6-204ENST00000504181 TROVE2P10155 538 aaKnown RBP eCLIP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms