RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 OR51S1Q8NGJ8 323 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 OR10D4PQ8NGN7 298 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 OR1J2Q8NGS2 313 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 OR8S1Q8NH09 359 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 OR51E1Q8TCB6 317 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 EMG1Q92979 244 aaKnown RBP6.55□□□□□ -1.36
PDGFC-203ENST00000502773 TMEM45BQ96B21 275 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 THOC3Q96J01 351 aaKnown RBP6.55□□□□□ -1.36
PDGFC-203ENST00000502773 OR2A7Q96R45 310 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 MFFQ9GZY8 342 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 RIMS4Q9H426 269 aaPredicted RBP6.55□□□□□ -1.36
PDGFC-203ENST00000502773 PLK3Q9H4B4 646 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 BCO1Q9HAY6 547 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 SPACA1Q9HBV2 294 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 GLRX2Q9NS18 164 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 SPAG17Q6Q759 2223 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 OR2M5A3KFT3 312 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 SMPD2O60906 423 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 TTRP02766 147 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 ADRA2CP18825 462 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 RBMXP38159 391 aaKnown RBP6.55□□□□□ -1.36
PDGFC-203ENST00000502773 PTGFRP43088 359 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 IL13RA1P78552 427 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 TGFBR3Q03167 851 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 NCMAPQ5T1S8 102 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 PRAMEF20Q5VT98 475 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 FOXL2NBQ6ZUU3 175 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 SLC16A14Q7RTX9 510 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 C20orf196Q8IYI0 205 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 SEH1LQ96EE3 360 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 ZNF845Q96IR2 970 aaPredicted RBP6.55□□□□□ -1.36
PDGFC-203ENST00000502773 FAM71F1Q96KD3 344 aaPredicted RBP6.55□□□□□ -1.36
PDGFC-203ENST00000502773 RSRP1Q9BUV0 290 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 RNF122Q9H9V4 155 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 SIRT7Q9NRC8 400 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 GAR1Q9NY12 217 aaKnown RBP6.55□□□□□ -1.36
PDGFC-203ENST00000502773 B3GALT1Q9Y5Z6 326 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 LRP5LA4QPB2 252 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 LANCL1O43813 399 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 ACTL6AO96019 429 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 PRH1P02810 166 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 CTXN2P0C2S0 81 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 PMELP40967 661 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 ALDH3B1P43353 468 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 RBP2P50120 134 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 FUT6P51993 359 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 DHODHQ02127 395 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 MZT1Q08AG7 82 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 SRSF5Q13243 272 aaKnown RBP6.55□□□□□ -1.36
PDGFC-203ENST00000502773 VAX1Q5SQQ9 334 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 RBMS3Q6XE24 437 aaKnown RBP6.55□□□□□ -1.36
PDGFC-203ENST00000502773 ZNF813Q6ZN06 617 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 TMED4Q7Z7H5 227 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 LYG2Q86SG7 212 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 TMEM200AQ86VY9 491 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 PXT1Q8NFP0 134 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 SCARB1Q8WTV0 552 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 PHYHIPLQ96FC7 376 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 EMC6Q9BV81 110 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 LINC00470Q9BZP3 86 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 TMPRSS5Q9H3S3 457 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 MRPL15Q9P015 296 aaKnown RBP6.55□□□□□ -1.36
PDGFC-203ENST00000502773 HS3ST3B1Q9Y662 390 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 NUP210LQ5VU65 1888 aa6.55□□□□□ -1.36
PDGFC-203ENST00000502773 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.54□□□□□ -1.36
PDGFC-203ENST00000502773 A0A1W2PNR3 127 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 RFPL4AA6NLU0 287 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 FIGNL2A6NMB9 653 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 RFPL4AL1F8VTS6 287 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 LCATP04180 440 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 CRYBA1P05813 215 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 OR4E1P0C645 316 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 HIST3H3Q16695 136 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 SAPCD1Q5SSQ6 148 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 VHLLQ6RSH7 139 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 FJX1Q86VR8 437 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 C9orf62Q8N4C0 152 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 OR1F12Q8NHA8 337 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 AQP3Q92482 292 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 HSD17B8Q92506 261 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 ARL11Q969Q4 196 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 RNF170Q96K19 258 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.54□□□□□ -1.36
PDGFC-203ENST00000502773 TDRD6O60522 2096 aaKnown RBP6.54□□□□□ -1.36
PDGFC-203ENST00000502773 FAM90A10PA6NDY2 464 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 FAM90A18PA6NE21 464 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 FAM90A16PA6NEW6 464 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 FAM90A20PA6NIJ5 464 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 FAM90A8PA6NJQ4 464 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 FAM90A7PA6NKC0 464 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 FAM90A22PA8MWA6 464 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 FAM90A12PA8MX19 464 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 FAM90A5PA8MXJ8 464 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 FAM90A23PA8MXZ1 464 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 ZNF587BE7ETH6 402 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 F5H5K5 113 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 J3QW42 95 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 NDUFS8O00217 210 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 GOSR2O14653 212 aa6.54□□□□□ -1.36
PDGFC-203ENST00000502773 PRKNO60260 465 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms