RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 RNF170Q96K19 258 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 Q96MT0 163 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 ALS2CR12Q96Q35 445 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 NAPGQ99747 312 aaPredicted RBP2.32□□□□□ -2.04
SMC4-225ENST00000497203 NUDT9Q9BW91 350 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 RSPO3Q9BXY4 272 aaPredicted RBP2.32□□□□□ -2.04
SMC4-225ENST00000497203 RBFOX1Q9NWB1 397 aaKnown RBP2.32□□□□□ -2.04
SMC4-225ENST00000497203 KLF12Q9Y4X4 402 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 SYNRGQ9UMZ2 1314 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 KIF26AQ9ULI4 1882 aaPredicted RBP2.31□□□□□ -2.04
SMC4-225ENST00000497203 E7EWF7 191 aa2.31□□□□□ -2.04
SMC4-225ENST00000497203 SMC2O95347 1197 aa2.31□□□□□ -2.04
SMC4-225ENST00000497203 RPN2P04844 631 aa2.31□□□□□ -2.04
SMC4-225ENST00000497203 S100A9P06702 114 aaKnown RBP2.31□□□□□ -2.04
SMC4-225ENST00000497203 MMP7P09237 267 aaPredicted RBP2.31□□□□□ -2.04
SMC4-225ENST00000497203 CCDC172P0C7W6 258 aa2.31□□□□□ -2.04
SMC4-225ENST00000497203 PRSS3P35030 304 aa2.31□□□□□ -2.04
SMC4-225ENST00000497203 TRDNQ13061 729 aa2.31□□□□□ -2.04
SMC4-225ENST00000497203 DUPD1Q68J44 220 aa2.31□□□□□ -2.04
SMC4-225ENST00000497203 SLC25A25Q6KCM7 469 aa2.31□□□□□ -2.04
SMC4-225ENST00000497203 ASCL4Q6XD76 172 aa2.31□□□□□ -2.04
SMC4-225ENST00000497203 SPANXA2-OT1Q8N9U9 137 aa2.31□□□□□ -2.04
SMC4-225ENST00000497203 OR4M2Q8NGB6 313 aa2.31□□□□□ -2.04
SMC4-225ENST00000497203 FARSAQ9Y285 508 aaKnown RBP2.31□□□□□ -2.04
SMC4-225ENST00000497203 NPHP4O75161 1426 aaPredicted RBP2.31□□□□□ -2.04
SMC4-225ENST00000497203 COL27A1Q8IZC6 1860 aaPredicted RBP2.31□□□□□ -2.04
SMC4-225ENST00000497203 A0A1W2PQ67 120 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 ISPDA4D126 451 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 SEC14L6B5MCN3 397 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 RPL36A-HNRNPH2H7BZ11 118 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 PRMT5O14744 637 aaPredicted RBP2.3□□□□□ -2.04
SMC4-225ENST00000497203 SPOPO43791 374 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 GMDSO60547 372 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 ALOX12BO75342 701 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 PTTG1O95997 202 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 OR5AL1P0C617 328 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 PRKACBP22694 351 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 GNRHRP30968 328 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 PSMB2P49721 201 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 PPP1CAP62136 330 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 RPL31P62899 125 aaKnown RBP2.3□□□□□ -2.04
SMC4-225ENST00000497203 ZNF616Q08AN1 781 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 DMC1Q14565 340 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 SHHQ15465 462 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 MAPRE2Q15555 327 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 VAMP3Q15836 100 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 C16orf87Q6PH81 154 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 LRRC52Q8N7C0 313 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 APCDD1LQ8NCL9 501 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 OR5M1Q8NGP8 315 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 OR6N2Q8NGY6 317 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 C18orf15Q96N68 181 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 GABRG3Q99928 467 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 STMN4Q9H169 189 aaPredicted RBP2.3□□□□□ -2.04
SMC4-225ENST00000497203 ZSCAN16Q9H4T2 348 aaPredicted RBP2.3□□□□□ -2.04
SMC4-225ENST00000497203 WDR55Q9H6Y2 383 aaPredicted RBP2.3□□□□□ -2.04
SMC4-225ENST00000497203 CSNK1G1Q9HCP0 422 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 VCX3AQ9NNX9 186 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 VAX2Q9UIW0 290 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 V9GYY9 64 aa2.3□□□□□ -2.04
SMC4-225ENST00000497203 ZNF608Q9ULD9 1512 aaPredicted RBP2.29□□□□□ -2.04
SMC4-225ENST00000497203 TRAV8-6A0A0B4J262 113 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 ANKRD20A5PA0PJZ0 165 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 NDUFS8O00217 210 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 CCDC22O60826 627 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 MAS1P04201 325 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 MLF1P58340 268 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 LY6EQ16553 131 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 CDNFQ49AH0 187 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 HHATQ5VTY9 493 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 ZNF101Q8IZC7 436 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 OSR2Q8N2R0 312 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 RNF10Q8N5U6 811 aaKnown RBP2.29□□□□□ -2.04
SMC4-225ENST00000497203 SLC35G3Q8N808 338 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 SLC25A29Q8N8R3 303 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 TMEM105Q8N8V8 129 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 ST20-AS1Q8NBB2 130 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 OR2Z1Q8NG97 314 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 OR51A7Q8NH64 312 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 CPNE4Q96A23 557 aaPredicted RBP2.29□□□□□ -2.04
SMC4-225ENST00000497203 LRRC39Q96DD0 335 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 ZNF2Q9BSG1 426 aaPredicted RBP2.29□□□□□ -2.04
SMC4-225ENST00000497203 C1orf50Q9BV19 199 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 CHID1Q9BWS9 393 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 MAP1LC3CQ9BXW4 147 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 TBL1XR1Q9BZK7 514 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 PLEKHF2Q9H8W4 249 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 SLC7A11Q9UPY5 501 aa2.29□□□□□ -2.04
SMC4-225ENST00000497203 BAZ2AQ9UIF9 1905 aaKnown RBP2.29□□□□□ -2.04
SMC4-225ENST00000497203 SIGLEC1Q9BZZ2 1709 aa2.28□□□□□ -2.04
SMC4-225ENST00000497203 IGHV6-1A0A0B4J1U7 121 aa2.28□□□□□ -2.04
SMC4-225ENST00000497203 CCL15-CCL14A0A0B4J2E2 113 aa2.28□□□□□ -2.04
SMC4-225ENST00000497203 BTNL10A8MVZ5 291 aa2.28□□□□□ -2.04
SMC4-225ENST00000497203 A8MWL6 223 aa2.28□□□□□ -2.04
SMC4-225ENST00000497203 RFXANKO14593 260 aa2.28□□□□□ -2.04
SMC4-225ENST00000497203 POLR1CO15160 346 aaPredicted RBP2.28□□□□□ -2.04
SMC4-225ENST00000497203 CDRT1O95170 752 aa2.28□□□□□ -2.04
SMC4-225ENST00000497203 IGLV2-8P01709 118 aa2.28□□□□□ -2.04
SMC4-225ENST00000497203 IVLP07476 585 aa2.28□□□□□ -2.04
SMC4-225ENST00000497203 TPM1P09493 284 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms