RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 IGHA1P01876 353 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 GYPAP02724 150 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 DUX4L2P0CJ85 424 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 DUX4L3P0CJ86 424 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 DUX4L4P0CJ87 422 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 DUX4L5P0CJ88 424 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 DUX4L6P0CJ89 424 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 DUX4L7P0CJ90 424 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 AMY2BP19961 511 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 SRP14P37108 136 aaKnown RBP13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 PITPNBP48739 271 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 NANOS3P60323 173 aaKnown RBP13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 ACTC1P68032 377 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 ACTA1P68133 377 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 ADARB1P78563 741 aaKnown RBP13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 GABPB1Q06547 395 aaPredicted RBP13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 SMN1Q16637 294 aaKnown RBP13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 ODF4Q2M2E3 257 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 OGFRL1Q5TC84 451 aaPredicted RBP13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 WDR25Q64LD2 544 aaPredicted RBP13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 DUX4L9Q6RFH8 374 aaPredicted RBP13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 C1QL2Q7Z5L3 287 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 PACRGLQ8N7B6 248 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 OR8B3Q8NGG8 313 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 OR8B2Q96RD0 313 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 WDR13Q9H1Z4 485 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 C7orf69Q9H7B7 122 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 SMURF1Q9HCE7 757 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 DUX4Q9UBX2 424 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 ENPP5Q9UJA9 477 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 GNG8Q9UK08 70 aa13.42□□□□□ -0.26
DNMT3A-215ENST00000496570 TRAV38-1A0A0B4J264 116 aa13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 DAPL1A0PJW8 107 aa13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 A6NIN4 97 aa13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 DHRS7CA6NNS2 312 aa13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 ZNF732B4DXR9 585 aa13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 C22orf46C9J442 243 aa13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 MTRF1O75570 445 aaKnown RBP13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 RHBDL1O75783 438 aa13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 GNB2P62879 340 aa13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 SRSF2Q01130 221 aaKnown RBP13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 PAX8Q06710 450 aa13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 ZNF691Q5VV52 312 aa13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 FDX2Q6P4F2 183 aa13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 MOB3CQ70IA8 216 aa13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 DOK3Q7L591 496 aa13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 ACBD7Q8N6N7 88 aa13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 OR5A2Q8NGI9 324 aa13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 OR10Z1Q8NGY1 313 aa13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 PELI1Q96FA3 418 aa13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 KAAG1Q9UBP8 84 aa13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 NKX1-2Q9UD57 310 aaPredicted RBP13.41□□□□□ -0.26
DNMT3A-215ENST00000496570 IGHV2-70DA0A0C4DH43 119 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 H3BSH0 61 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 NRASP01111 189 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 MUC1P15941 1255 aaPredicted RBP13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 GNG3P63215 75 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 GALEQ14376 348 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 KLF17Q5JT82 389 aaPredicted RBP13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 CLVS2Q5SYC1 327 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 KCTD8Q6ZWB6 473 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 NLRC3Q7RTR2 1065 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 KCTD20Q7Z5Y7 419 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 THAP5Q7Z6K1 395 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 LHFPL3Q86UP9 236 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 RDH10Q8IZV5 341 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 FGFRL1Q8N441 504 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 OR2G2Q8NGZ5 317 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 RAB40AQ8WXH6 277 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 AQP3Q92482 292 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 Q96MT0 163 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 RASSF4Q9H2L5 321 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 ISG20L2Q9H9L3 353 aaKnown RBP13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 GPR173Q9NS66 373 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 FRRS1LQ9P0K9 344 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 CLN8Q9UBY8 286 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 OR5V1Q9UGF6 321 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 PCDHGB1Q9Y5G3 927 aa13.4□□□□□ -0.26
DNMT3A-215ENST00000496570 DOCK11Q5JSL3 2073 aa13.4□□□□□ -0.27
DNMT3A-215ENST00000496570 LOC107986453A0A1B0GWG9 222 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 PQLC2LA1A4F0 135 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 OR5B21A6NL26 309 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 SNTNA6NMZ2 147 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 AKR7A2O43488 359 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 ADAM20O43506 726 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 NDUFA2O43678 99 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 TFF1P04155 84 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 RAB40BQ12829 278 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 KCNJ8Q15842 424 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 TUSC1Q2TAM9 212 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 PLCXD3Q63HM9 321 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 STUMQ69YW2 141 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 FAM220AQ7Z4H9 259 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 ZNF555Q8NEP9 628 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 OR52I1Q8NGK6 324 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 CNIH3Q8TBE1 160 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 C4orf36Q96KX1 117 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 HIST1H2AAQ96QV6 131 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 TRIM36Q9NQ86 728 aa13.39□□□□□ -0.27
DNMT3A-215ENST00000496570 C8orf4Q9NR00 106 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms