RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 OR2T12Q8NG77 320 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 OR52M1Q8NGK5 317 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.51□□□□□ -1.85
VPS52-222ENST00000495981 RDH5Q92781 318 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 SLC38A4Q969I6 547 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 MAL2Q969L2 176 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 MRPL53Q96EL3 112 aaKnown RBP3.51□□□□□ -1.85
VPS52-222ENST00000495981 SLC47A1Q96FL8 570 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 ANKRD27Q96NW4 1050 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 OXGR1Q96P68 337 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 OR52E6Q96RD3 313 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 SH3GL3Q99963 347 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 WFDC6Q9BQY6 131 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 TMEM109Q9BVC6 243 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 RBM4Q9BWF3 364 aaKnown RBP3.51□□□□□ -1.85
VPS52-222ENST00000495981 ZNF416Q9BWM5 594 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 TAPBPLQ9BX59 468 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 IKZF5Q9H5V7 419 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 ZNF385DQ9H6B1 395 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 WDR55Q9H6Y2 383 aaPredicted RBP3.51□□□□□ -1.85
VPS52-222ENST00000495981 ZNF665Q9H7R5 613 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 DCLRE1BQ9H816 532 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 MTHFD2LQ9H903 347 aaPredicted RBP3.51□□□□□ -1.85
VPS52-222ENST00000495981 BCL2L10Q9HD36 194 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 MRPL39Q9NYK5 338 aaKnown RBP3.51□□□□□ -1.85
VPS52-222ENST00000495981 TREM2Q9NZC2 230 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 CALML5Q9NZT1 146 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 SLC7A8Q9UHI5 535 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 NSG2Q9Y328 171 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 GMEB1Q9Y692 573 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 IGHV1-69-2A0A0G2JMI3 117 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 A0A0G2JMP0 313 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 A0A0U1RQV5 110 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 A0A0X1KG70 313 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 ZSCAN5BA6NJL1 495 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 A8MXK9 166 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 FAM25EA8MYX2 175 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 J3QLI3 93 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 TM9SF1O15321 606 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 BIRC5O15392 142 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 AKAP8O43823 692 aaKnown RBP3.5□□□□□ -1.85
VPS52-222ENST00000495981 TPST1O60507 370 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 ATP6V1G1O75348 118 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 E2F6O75461 281 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 UBL3O95164 117 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 MPZL1O95297 269 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 KRT75O95678 551 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 THY1P04216 161 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 MMP7P09237 267 aaPredicted RBP3.5□□□□□ -1.85
VPS52-222ENST00000495981 PATE4P0C8F1 98 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 PGA4P0DJD7 388 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 PGA3P0DJD8 388 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 ZNF250P15622 560 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 ZNF43P17038 809 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 NCF2P19878 526 aaPredicted RBP3.5□□□□□ -1.85
VPS52-222ENST00000495981 TCN1P20061 433 aaPredicted RBP3.5□□□□□ -1.85
VPS52-222ENST00000495981 MDKP21741 143 aaPredicted RBP3.5□□□□□ -1.85
VPS52-222ENST00000495981 COL8A2P25067 703 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 GTF2E2P29084 291 aaKnown RBP3.5□□□□□ -1.85
VPS52-222ENST00000495981 EPHA2P29317 976 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 SLC1A6P48664 564 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 MRPL19P49406 292 aaKnown RBP3.5□□□□□ -1.85
VPS52-222ENST00000495981 RPL14P50914 215 aaKnown RBP3.5□□□□□ -1.85
VPS52-222ENST00000495981 CRYBA2P53672 197 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 SEC61A1P61619 476 aaKnown RBP3.5□□□□□ -1.85
VPS52-222ENST00000495981 RPS23P62266 143 aaKnown RBP3.5□□□□□ -1.85
VPS52-222ENST00000495981 GLO1Q04760 184 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 PUDPQ08623 228 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 LRRC74AQ0VAA2 488 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 ZP4Q12836 540 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 RGNQ15493 299 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 MS4A18Q3C1V0 323 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 SPRNQ5BIV9 151 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 ARMCX4Q5H9R4 360 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 KLF17Q5JT82 389 aaPredicted RBP3.5□□□□□ -1.85
VPS52-222ENST00000495981 AVPI1Q5T686 147 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 CARD17Q5XLA6 110 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 REP15Q6BDI9 236 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 COX8CQ7Z4L0 72 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 CCDC36Q8IYA8 594 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 ZNF101Q8IZC7 436 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 GPR137CQ8N3F9 429 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 MREGQ8N565 214 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 DEFB108BQ8NET1 73 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 NOXO1Q8NFA2 376 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 OR4M2Q8NGB6 313 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 OR6S1Q8NH40 331 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 TMED6Q8WW62 240 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 GTF2H4Q92759 462 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 TMEM54Q969K7 222 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 NABP1Q96AH0 204 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 ZBTB9Q96C00 473 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 SLC25A36Q96CQ1 311 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 LRRC58Q96CX6 371 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 LRR1Q96L50 414 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 ZNF48Q96MX3 618 aaPredicted RBP3.5□□□□□ -1.85
VPS52-222ENST00000495981 ZNF583Q96ND8 569 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 OR52B2Q96RD2 323 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 TMEM43Q9BTV4 400 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 ZNF426Q9BUY5 554 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 223.5 ms