RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 OR2T4Q8NH00 348 aa10.79□□□□□ -0.68
COL1A1-209ENST00000495677 FANK1Q8TC84 345 aa10.79□□□□□ -0.68
COL1A1-209ENST00000495677 DPF1Q92782 380 aa10.79□□□□□ -0.68
COL1A1-209ENST00000495677 IFT27Q9BW83 186 aa10.79□□□□□ -0.68
COL1A1-209ENST00000495677 FN3KQ9H479 309 aa10.79□□□□□ -0.68
COL1A1-209ENST00000495677 RGCCQ9H4X1 137 aa10.79□□□□□ -0.68
COL1A1-209ENST00000495677 ELL3Q9HB65 397 aaPredicted RBP10.79□□□□□ -0.68
COL1A1-209ENST00000495677 ABCB10Q9NRK6 738 aa10.79□□□□□ -0.68
COL1A1-209ENST00000495677 C19orf12Q9NSK7 152 aa10.79□□□□□ -0.68
COL1A1-209ENST00000495677 CENPMQ9NSP4 180 aa10.79□□□□□ -0.68
COL1A1-209ENST00000495677 CMTM6Q9NX76 183 aa10.79□□□□□ -0.68
COL1A1-209ENST00000495677 USE1Q9NZ43 259 aa10.79□□□□□ -0.68
COL1A1-209ENST00000495677 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.79□□□□□ -0.68
COL1A1-209ENST00000495677 COMMD3-BMI1R4GMX3 469 aa10.79□□□□□ -0.68
COL1A1-209ENST00000495677 TCRBV4S1A1TA0A5B7 111 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 ODF3BA8MYP8 253 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 TBX1O43435 398 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 SERPINA1P01009 418 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 TFF1P04155 84 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 HOXD3P31249 432 aaPredicted RBP10.78□□□□□ -0.68
COL1A1-209ENST00000495677 ENTPD1P49961 510 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 GMFBP60983 142 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 RPL31P62899 125 aaKnown RBP10.78□□□□□ -0.68
COL1A1-209ENST00000495677 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL1A1-209ENST00000495677 KLF10Q13118 480 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 RNF144BQ7Z419 303 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 ARPINQ7Z6K5 226 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 CENPVQ7Z7K6 275 aaPredicted RBP10.78□□□□□ -0.68
COL1A1-209ENST00000495677 TMEM219Q86XT9 240 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 SLC15A3Q8IY34 581 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 LINC00482Q8N8I6 264 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 TMEM185AQ8NFB2 350 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 OR11H6Q8NGC7 330 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 ZNRF4Q8WWF5 429 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 C7orf34Q96L11 122 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 RASL12Q9NYN1 266 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 ZNF319Q9P2F9 582 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 N6AMT1Q9Y5N5 214 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 TENM2Q9NT68 2774 aa10.78□□□□□ -0.68
COL1A1-209ENST00000495677 TVP23AA6NH52 213 aa10.77□□□□□ -0.69
COL1A1-209ENST00000495677 C17orf98A8MV24 154 aa10.77□□□□□ -0.69
COL1A1-209ENST00000495677 FAM90A22PA8MWA6 464 aa10.77□□□□□ -0.69
COL1A1-209ENST00000495677 H3BUI4 141 aa10.77□□□□□ -0.69
COL1A1-209ENST00000495677 ZNF593O00488 134 aaPredicted RBP10.77□□□□□ -0.69
COL1A1-209ENST00000495677 EDF1O60869 148 aaKnown RBP10.77□□□□□ -0.69
COL1A1-209ENST00000495677 AZGP1P25311 298 aaKnown RBP10.77□□□□□ -0.69
COL1A1-209ENST00000495677 FMO3P31513 532 aa10.77□□□□□ -0.69
COL1A1-209ENST00000495677 PYCR1P32322 319 aa10.77□□□□□ -0.69
COL1A1-209ENST00000495677 GSSP48637 474 aa10.77□□□□□ -0.69
COL1A1-209ENST00000495677 CX3CR1P49238 355 aa10.77□□□□□ -0.69
COL1A1-209ENST00000495677 ARSJQ5FYB0 599 aaPredicted RBP10.77□□□□□ -0.69
COL1A1-209ENST00000495677 LDLRAD2Q5SZI1 272 aa10.77□□□□□ -0.69
COL1A1-209ENST00000495677 ZNF626Q68DY1 528 aa10.77□□□□□ -0.69
COL1A1-209ENST00000495677 C16orf82Q7Z2V1 217 aa10.77□□□□□ -0.69
COL1A1-209ENST00000495677 ZNF561Q8N587 486 aa10.77□□□□□ -0.69
COL1A1-209ENST00000495677 PROKR2Q8NFJ6 384 aa10.77□□□□□ -0.69
COL1A1-209ENST00000495677 ZNF671Q8TAW3 534 aa10.77□□□□□ -0.69
COL1A1-209ENST00000495677 DYDC1Q8WWB3 177 aa10.77□□□□□ -0.69
COL1A1-209ENST00000495677 MYDGFQ969H8 173 aa10.77□□□□□ -0.69
COL1A1-209ENST00000495677 ITFG2Q969R8 447 aa10.77□□□□□ -0.69
COL1A1-209ENST00000495677 RNF170Q96K19 258 aa10.77□□□□□ -0.69
COL1A1-209ENST00000495677 MCRIP2Q9BUT9 160 aaKnown RBP10.77□□□□□ -0.69
COL1A1-209ENST00000495677 A0A0G2JND7 137 aa10.76□□□□□ -0.69
COL1A1-209ENST00000495677 ZNF850A8MQ14 1090 aa10.76□□□□□ -0.69
COL1A1-209ENST00000495677 MTRF1O75570 445 aaKnown RBP10.76□□□□□ -0.69
COL1A1-209ENST00000495677 RBP4P02753 201 aa10.76□□□□□ -0.69
COL1A1-209ENST00000495677 ANXA2P07355 339 aaKnown RBP10.76□□□□□ -0.69
COL1A1-209ENST00000495677 SMIM11AP58511 58 aa10.76□□□□□ -0.69
COL1A1-209ENST00000495677 LIPEQ05469 1076 aa10.76□□□□□ -0.69
COL1A1-209ENST00000495677 PRDX4Q13162 271 aa10.76□□□□□ -0.69
COL1A1-209ENST00000495677 SSX2Q16385 188 aa10.76□□□□□ -0.69
COL1A1-209ENST00000495677 TMEM95Q3KNT9 176 aa10.76□□□□□ -0.69
COL1A1-209ENST00000495677 SLC35F1Q5T1Q4 408 aa10.76□□□□□ -0.69
COL1A1-209ENST00000495677 ZNF770Q6IQ21 691 aaPredicted RBP10.76□□□□□ -0.69
COL1A1-209ENST00000495677 LYPD4Q6UWN0 246 aa10.76□□□□□ -0.69
COL1A1-209ENST00000495677 CCDC121Q6ZUS5 278 aa10.76□□□□□ -0.69
COL1A1-209ENST00000495677 PIGWQ7Z7B1 504 aa10.76□□□□□ -0.69
COL1A1-209ENST00000495677 FAM86B1Q8N7N1 296 aa10.76□□□□□ -0.69
COL1A1-209ENST00000495677 HPSE2Q8WWQ2 592 aa10.76□□□□□ -0.69
COL1A1-209ENST00000495677 FGF23Q9GZV9 251 aaPredicted RBP10.76□□□□□ -0.69
COL1A1-209ENST00000495677 OR10A2Q9H208 303 aa10.76□□□□□ -0.69
COL1A1-209ENST00000495677 GMPR2Q9P2T1 348 aaKnown RBP10.76□□□□□ -0.69
COL1A1-209ENST00000495677 DHRS12A0PJE2 317 aa10.75□□□□□ -0.69
COL1A1-209ENST00000495677 GSTA4O15217 222 aa10.75□□□□□ -0.69
COL1A1-209ENST00000495677 SPARCP09486 303 aa10.75□□□□□ -0.69
COL1A1-209ENST00000495677 COX7A1P24310 79 aa10.75□□□□□ -0.69
COL1A1-209ENST00000495677 ACKR3P25106 362 aa10.75□□□□□ -0.69
COL1A1-209ENST00000495677 LMO1P25800 156 aa10.75□□□□□ -0.69
COL1A1-209ENST00000495677 HSD11B1P28845 292 aa10.75□□□□□ -0.69
COL1A1-209ENST00000495677 BLVRAP53004 296 aa10.75□□□□□ -0.69
COL1A1-209ENST00000495677 DLX6P56179 175 aa10.75□□□□□ -0.69
COL1A1-209ENST00000495677 ZNF121P58317 390 aaPredicted RBP10.75□□□□□ -0.69
COL1A1-209ENST00000495677 CASC10Q5T4H9 136 aa10.75□□□□□ -0.69
COL1A1-209ENST00000495677 MINOS1Q5TGZ0 78 aa10.75□□□□□ -0.69
COL1A1-209ENST00000495677 LCN8Q6JVE9 175 aa10.75□□□□□ -0.69
COL1A1-209ENST00000495677 RPL13AP3Q6NVV1 102 aa10.75□□□□□ -0.69
COL1A1-209ENST00000495677 FAM57BQ71RH2 274 aa10.75□□□□□ -0.69
COL1A1-209ENST00000495677 THAP5Q7Z6K1 395 aa10.75□□□□□ -0.69
COL1A1-209ENST00000495677 TIGD4Q8IY51 512 aa10.75□□□□□ -0.69
COL1A1-209ENST00000495677 OR4X2Q8NGF9 303 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 261.3 ms