RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 ST8SIA4Q92187 359 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 C12orf43Q96C57 262 aaKnown RBP12.91□□□□□ -0.34
LIMS2-216ENST00000494613 FAM71F1Q96KD3 344 aaPredicted RBP12.91□□□□□ -0.34
LIMS2-216ENST00000494613 WDFY2Q96P53 400 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 MNTQ99583 582 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 OSBPL10Q9BXB5 764 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 OR51I2Q9H344 312 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 GPR84Q9NQS5 396 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 SNTG1Q9NSN8 517 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 CLN6Q9NWW5 311 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 DUX4Q9UBX2 424 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 ENOPH1Q9UHY7 261 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 OAZ3Q9UMX2 235 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 TENM1Q9UKZ4 2725 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 CENPVL3A0A0U1RRI6 287 aa12.9□□□□□ -0.34
LIMS2-216ENST00000494613 ZNF732B4DXR9 585 aa12.9□□□□□ -0.34
LIMS2-216ENST00000494613 ZNF670-ZNF695F2Z2N8 137 aa12.9□□□□□ -0.34
LIMS2-216ENST00000494613 P2RY10O00398 339 aa12.9□□□□□ -0.34
LIMS2-216ENST00000494613 RHBDL1O75783 438 aa12.9□□□□□ -0.34
LIMS2-216ENST00000494613 TTRP02766 147 aa12.9□□□□□ -0.34
LIMS2-216ENST00000494613 HKR1P10072 659 aa12.9□□□□□ -0.34
LIMS2-216ENST00000494613 MFGE8Q08431 387 aaPredicted RBP12.9□□□□□ -0.34
LIMS2-216ENST00000494613 DEFB112Q30KQ8 113 aa12.9□□□□□ -0.34
LIMS2-216ENST00000494613 ZNF829Q3KNS6 432 aaPredicted RBP12.9□□□□□ -0.34
LIMS2-216ENST00000494613 CEP78Q5JTW2 689 aa12.9□□□□□ -0.34
LIMS2-216ENST00000494613 GPR157Q5UAW9 335 aa12.9□□□□□ -0.34
LIMS2-216ENST00000494613 SLC36A1Q7Z2H8 476 aa12.9□□□□□ -0.34
LIMS2-216ENST00000494613 THAP5Q7Z6K1 395 aa12.9□□□□□ -0.34
LIMS2-216ENST00000494613 LY6G5BQ8NDX9 201 aa12.9□□□□□ -0.34
LIMS2-216ENST00000494613 TBX15Q96SF7 602 aa12.9□□□□□ -0.34
LIMS2-216ENST00000494613 PRDM13Q9H4Q3 707 aa12.9□□□□□ -0.34
LIMS2-216ENST00000494613 DNAJB11Q9UBS4 358 aa12.9□□□□□ -0.34
LIMS2-216ENST00000494613 NUFIP1Q9UHK0 495 aaKnown RBP12.9□□□□□ -0.34
LIMS2-216ENST00000494613 MRM2Q9UI43 246 aaKnown RBP12.9□□□□□ -0.34
LIMS2-216ENST00000494613 RPUSD1Q9UJJ7 312 aaKnown RBP12.9□□□□□ -0.34
LIMS2-216ENST00000494613 PIGLQ9Y2B2 252 aa12.9□□□□□ -0.34
LIMS2-216ENST00000494613 MDFIC2A0A1B0GVS7 189 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 SAC3D1A6NKF1 404 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 NDUFB3O43676 98 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 NRASP01111 189 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 GNG3P63215 75 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 EGR3Q06889 387 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 METTL11BQ5VVY1 283 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 STUMQ69YW2 141 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 COMMD2Q86X83 199 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 GID4Q8IVV7 300 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 ELMOD2Q8IZ81 293 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 OR51G2Q8NGK0 314 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 ZNF671Q8TAW3 534 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 PYDC1Q8WXC3 89 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 UBE2FQ969M7 185 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 SLC25A28Q96A46 364 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 MED30Q96HR3 178 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 RAB3IPQ96QF0 476 aaPredicted RBP12.89□□□□□ -0.35
LIMS2-216ENST00000494613 SIRPDQ9H106 197 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 WARS2Q9UGM6 360 aaKnown RBP12.89□□□□□ -0.35
LIMS2-216ENST00000494613 OR52A1Q9UKL2 312 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 GTF2A1LQ9UNN4 478 aa12.89□□□□□ -0.35
LIMS2-216ENST00000494613 A0A1B0GTI1 187 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 LOC110117498-PIK3R3F6TDL0 507 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 CLDN34H7C241 214 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 GPR37O15354 613 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 MTRF1O75570 445 aaKnown RBP12.88□□□□□ -0.35
LIMS2-216ENST00000494613 TFF1P04155 84 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 RNASE1P07998 156 aaKnown RBP12.88□□□□□ -0.35
LIMS2-216ENST00000494613 OR2T7P0C7T2 308 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 FAHP16930 419 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 HTR1FP30939 366 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 FOXL1Q12952 345 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 IKZF1Q13422 519 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 PDCD1Q15116 288 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 AWAT1Q58HT5 328 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 ZBTB37Q5TC79 503 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 RUSC1-AS1Q66K80 236 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 C16orf87Q6PH81 154 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 ZNF788Q6ZQV5 615 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 PLEKHG7Q6ZR37 379 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 SSX6Q7RTT6 188 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 FAM216BQ8N7L0 139 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 OR2T27Q8NH04 317 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 ANGPTL6Q8NI99 470 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 LHX4Q969G2 390 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 ZDHHC16Q969W1 377 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 EME1Q96AY2 570 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 TBX5Q99593 518 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 RBM4BQ9BQ04 359 aaKnown RBP12.88□□□□□ -0.35
LIMS2-216ENST00000494613 GABARAPL3Q9BY60 117 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 DNTTIP1Q9H147 329 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 RIBC2Q9H4K1 309 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 SLC22A13Q9Y226 551 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 SNX5Q9Y5X3 404 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 R4GMQ9 66 aa12.88□□□□□ -0.35
LIMS2-216ENST00000494613 A0A1W2PQL4 384 aaPredicted RBP12.87□□□□□ -0.35
LIMS2-216ENST00000494613 A6NIN4 97 aa12.87□□□□□ -0.35
LIMS2-216ENST00000494613 OR2AT4A6NND4 320 aa12.87□□□□□ -0.35
LIMS2-216ENST00000494613 HOXA3O43365 443 aaPredicted RBP12.87□□□□□ -0.35
LIMS2-216ENST00000494613 DHRS3O75911 302 aa12.87□□□□□ -0.35
LIMS2-216ENST00000494613 RPP14O95059 124 aaKnown RBP12.87□□□□□ -0.35
LIMS2-216ENST00000494613 ACAA1P09110 424 aaPredicted RBP12.87□□□□□ -0.35
LIMS2-216ENST00000494613 GLRA1P23415 457 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms