RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 TSPO2Q5TGU0 170 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 AADACL3Q5VUY0 350 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 SLC23A3Q6PIS1 610 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 ACOT7LQ6ZUV0 252 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 AKR7LQ8NHP1 331 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 KCNG3Q8TAE7 436 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 NUDT16L1Q9BRJ7 211 aaKnown RBP11.1□□□□□ -0.63
CLIC4-202ENST00000488683 SMIM3Q9BZL3 60 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 METTL8Q9H825 291 aaKnown RBP11.1□□□□□ -0.63
CLIC4-202ENST00000488683 C19orf25Q9UFG5 118 aaPredicted RBP11.1□□□□□ -0.63
CLIC4-202ENST00000488683 ANAPC10Q9UM13 185 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 HDGFL3Q9Y3E1 203 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 A0A0J9YW62 118 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 DHRS7CA6NNS2 312 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 CRHP06850 196 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 RFPL3SP0C7P2 107 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 MC2RQ01718 297 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 RIPPLY1Q0D2K3 151 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 RAB32Q13637 225 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 SNTB1Q13884 538 aaKnown RBP11.1□□□□□ -0.63
CLIC4-202ENST00000488683 ZNF239Q16600 458 aaKnown RBP11.1□□□□□ -0.63
CLIC4-202ENST00000488683 SP6Q3SY56 376 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 DOK3Q7L591 496 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 INO80EQ8NBZ0 244 aaPredicted RBP11.1□□□□□ -0.63
CLIC4-202ENST00000488683 OR5H2Q8NGV7 314 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 FGFBP3Q8TAT2 258 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 SLC25A43Q8WUT9 341 aaPredicted RBP11.1□□□□□ -0.63
CLIC4-202ENST00000488683 OR10A2Q9H208 303 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 SLC25A32Q9H2D1 315 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 LIME1Q9H400 295 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 FAM96BQ9Y3D0 163 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 SIT1Q9Y3P8 196 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 TNRC6BQ9UPQ9 1833 aaKnown RBP11.1□□□□□ -0.63
CLIC4-202ENST00000488683 DCHS1Q96JQ0 3298 aa11.1□□□□□ -0.63
CLIC4-202ENST00000488683 KNTC1P50748 2209 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 ZIC3O60481 467 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 NAT1P18440 290 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 PSMB6P28072 239 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 PTGFRP43088 359 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 SLC35A1P78382 337 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 ZNF273Q14593 569 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 TAF9Q16594 264 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 GUCA2BQ16661 112 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 ZNF774Q6NX45 483 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 MOB3CQ70IA8 216 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 OR5AP2Q8NGF4 316 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 NABP1Q96AH0 204 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 FAAP24Q9BTP7 215 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 IGHV1-45A0A0A0MS14 117 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 NPIPA2E9PIF3 369 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 NPIPA3F8WFD2 350 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 SCGNO76038 276 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 ACTL6AO96019 429 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 GSTP1P09211 210 aaKnown RBP11.09□□□□□ -0.63
CLIC4-202ENST00000488683 ICAM2P13598 275 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 B4GALT1P15291 398 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 CNR1P21554 472 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 EIF1P41567 113 aaKnown RBP11.09□□□□□ -0.63
CLIC4-202ENST00000488683 OR3A2P47893 321 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 TAGLNQ01995 201 aaKnown RBP11.09□□□□□ -0.63
CLIC4-202ENST00000488683 FAHD2BQ6P2I3 314 aaPredicted RBP11.09□□□□□ -0.63
CLIC4-202ENST00000488683 GTPBP8Q8N3Z3 284 aaPredicted RBP11.09□□□□□ -0.63
CLIC4-202ENST00000488683 EIF4E3Q8N5X7 224 aaKnown RBP11.09□□□□□ -0.63
CLIC4-202ENST00000488683 TMEM156Q8N614 296 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 FAHD2AQ96GK7 314 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 GPHA2Q96T91 129 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 GPR132Q9UNW8 380 aa11.09□□□□□ -0.63
CLIC4-202ENST00000488683 IGLV3-1P01715 115 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 COX6A1P12074 109 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 ADCYAP1P18509 176 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 TBPP20226 339 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 ADH6P28332 368 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 GRB2P62993 217 aaKnown RBP11.08□□□□□ -0.64
CLIC4-202ENST00000488683 OR2A2Q6IF42 318 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 TOMM40LQ969M1 308 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 PECRQ9BY49 303 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 HS3ST3B1Q9Y662 390 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 R4GN57 208 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 DOCK10Q96BY6 2186 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 IGKV1-27A0A075B6S5 117 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 LOC102723996A0A087X1L8 192 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 LOC102725191A0A1B0GVB3 256 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 KLF7O75840 302 aaPredicted RBP11.08□□□□□ -0.64
CLIC4-202ENST00000488683 SCGB1D2O95969 90 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 TMEM225BP0DP42 221 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 MSR1P21757 451 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 ZNF169Q14929 603 aaPredicted RBP11.08□□□□□ -0.64
CLIC4-202ENST00000488683 AKIRIN2Q53H80 203 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 VAX1Q5SQQ9 334 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 TFAP2EQ6VUC0 442 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 ZIC4Q8N9L1 334 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 FAM117AQ9C073 453 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 DKKL1Q9UK85 242 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 FLVCR1Q9Y5Y0 555 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 FOXI3A8MTJ6 420 aaPredicted RBP11.08□□□□□ -0.64
CLIC4-202ENST00000488683 DNASE2O00115 360 aaPredicted RBP11.08□□□□□ -0.64
CLIC4-202ENST00000488683 TP53I11O14683 189 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 CCL2P13500 99 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 IGFBP7Q16270 282 aa11.08□□□□□ -0.64
CLIC4-202ENST00000488683 TMEM128Q5BJH2 165 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms