RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 TP53I3Q53FA7 332 aa13.26□□□□□ -0.29
CTDSP1-209ENST00000488627 PRSS35Q8N3Z0 413 aa13.26□□□□□ -0.29
CTDSP1-209ENST00000488627 OR5A2Q8NGI9 324 aa13.26□□□□□ -0.29
CTDSP1-209ENST00000488627 OR10Z1Q8NGY1 313 aa13.26□□□□□ -0.29
CTDSP1-209ENST00000488627 NANPQ8TBE9 248 aa13.26□□□□□ -0.29
CTDSP1-209ENST00000488627 STMN2Q93045 179 aa13.26□□□□□ -0.29
CTDSP1-209ENST00000488627 LGALS12Q96DT0 336 aa13.26□□□□□ -0.29
CTDSP1-209ENST00000488627 HIST1H2AAQ96QV6 131 aa13.26□□□□□ -0.29
CTDSP1-209ENST00000488627 WDR13Q9H1Z4 485 aa13.26□□□□□ -0.29
CTDSP1-209ENST00000488627 SMURF1Q9HCE7 757 aa13.26□□□□□ -0.29
CTDSP1-209ENST00000488627 TRIM36Q9NQ86 728 aa13.26□□□□□ -0.29
CTDSP1-209ENST00000488627 KAAG1Q9UBP8 84 aa13.26□□□□□ -0.29
CTDSP1-209ENST00000488627 CLN8Q9UBY8 286 aa13.26□□□□□ -0.29
CTDSP1-209ENST00000488627 ENPP5Q9UJA9 477 aa13.26□□□□□ -0.29
CTDSP1-209ENST00000488627 AUP1Q9Y679 476 aa13.26□□□□□ -0.29
CTDSP1-209ENST00000488627 DHRS7CA6NNS2 312 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 RNF212BA8MTL3 300 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 ZNF732B4DXR9 585 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 ANKRD65E5RJM6 399 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 ADAM20O43506 726 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 MPZL2O60487 215 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 RHBDL1O75783 438 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 NRASP01111 189 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 EPHA1P21709 976 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 GNG3P63215 75 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 ZNF91Q05481 1191 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 KLF17Q5JT82 389 aaPredicted RBP13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 WDR38Q5JTN6 314 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 MOB3CQ70IA8 216 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 THAP5Q7Z6K1 395 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 APH1BQ8WW43 257 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 TMEM158Q8WZ71 300 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 RDH12Q96NR8 316 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 ZNF649Q9BS31 505 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 RASSF4Q9H2L5 321 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 AMBNQ9NP70 447 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 ACOXLQ9NUZ1 547 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 SMPD3Q9NY59 655 aaPredicted RBP13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 ERVK-18Q9QC07 812 aa13.25□□□□□ -0.29
CTDSP1-209ENST00000488627 A0A1B0GW55 424 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 A6NIN4 97 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 AKR7A2O43488 359 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 TCF21O43680 179 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 DUX4L2P0CJ85 424 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 DUX4L3P0CJ86 424 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 DUX4L4P0CJ87 422 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 DUX4L5P0CJ88 424 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 DUX4L6P0CJ89 424 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 DUX4L7P0CJ90 424 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 PPIAL4GP0DN37 164 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 DBTP11182 482 aaKnown RBP13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 KIR3DL2P43630 455 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 NPY4RP50391 375 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 OR12D2P58182 307 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 ACTC1P68032 377 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 ACTA1P68133 377 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 RCN1Q15293 331 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 MICBQ29980 383 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 CLVS2Q5SYC1 327 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 ATPAF1Q5TC12 328 aaPredicted RBP13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 LPCAT4Q643R3 524 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 FDX2Q6P4F2 183 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 DUX4L9Q6RFH8 374 aaPredicted RBP13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 KCTD8Q6ZWB6 473 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 DOK3Q7L591 496 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 KCTD20Q7Z5Y7 419 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 PHC2Q8IXK0 858 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 ACBD7Q8N6N7 88 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 C12orf43Q96C57 262 aaKnown RBP13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 CCL13Q99616 98 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 OCEL1Q9H607 264 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 MRPS18AQ9NVS2 196 aaKnown RBP13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 DUX4Q9UBX2 424 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 GNG8Q9UK08 70 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 MYRFQ9Y2G1 1151 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 PCDHGB1Q9Y5G3 927 aa13.24□□□□□ -0.29
CTDSP1-209ENST00000488627 DAPL1A0PJW8 107 aa13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 OR5B21A6NL26 309 aa13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 SNTNA6NMZ2 147 aa13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 DVL1O14640 695 aa13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 WBP4O75554 376 aaKnown RBP13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 VENTXO95231 258 aa13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 TGM4P49221 684 aa13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 NANOS3P60323 173 aaKnown RBP13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 LRRC36Q1X8D7 754 aa13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 ODF4Q2M2E3 257 aa13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 PLCXD3Q63HM9 321 aa13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 STUMQ69YW2 141 aa13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 RDH10Q8IZV5 341 aa13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 OR5T2Q8NGG2 359 aa13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 OR2G2Q8NGZ5 317 aa13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 SPATA3Q8NHX4 192 aa13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 AQP3Q92482 292 aa13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 Q96MT0 163 aa13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 NUDT16L1Q9BRJ7 211 aaKnown RBP13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 GPR173Q9NS66 373 aa13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 FRRS1LQ9P0K9 344 aa13.23□□□□□ -0.29
CTDSP1-209ENST00000488627 A0A0A6YYJ9 748 aa13.22□□□□□ -0.29
CTDSP1-209ENST00000488627 PQLC2LA1A4F0 135 aa13.22□□□□□ -0.29
CTDSP1-209ENST00000488627 TMPRSS2O15393 492 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms