RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 XKR4Q5GH76 650 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 TTC23LQ6PF05 361 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 ALKAL1Q6UXT8 129 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 MBOAT1Q6ZNC8 495 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 PCP2Q8IVA1 136 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 ZNF786Q8N393 782 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 NUBPLQ8TB37 319 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 ZNF596Q8TC21 504 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 FAM104AQ969W3 186 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 EEF1AKMT3Q96AZ1 226 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 CREB3L1Q96BA8 519 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 DNAJC1Q96KC8 554 aaKnown RBP3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 ZNF285Q96NJ3 590 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 CCDC94Q9BW85 323 aaPredicted RBP3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 BEX1Q9HBH7 125 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 SLC40A1Q9NP59 571 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 CCNB1IP1Q9NPC3 277 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 MTCH1Q9NZJ7 389 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 FBN2P35556 2912 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 NUMA1Q14980 2115 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 MN1Q10571 1320 aaPredicted RBP3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 CABIN1Q9Y6J0 2220 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 CRYBG3Q68DQ2 2970 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 TRAV19A0A0A6YYK7 116 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 A0A1B0GW55 424 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 ERICH4A6NGS2 130 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 LYRM9A8MSI8 78 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 ICOSLGO75144 302 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 FKBP6O75344 327 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 CCNB2O95067 398 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 LYPLA2O95372 231 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 APODP05090 189 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 SERPINE2P07093 398 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 DUX4L2P0CJ85 424 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 DUX4L3P0CJ86 424 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 DUX4L5P0CJ88 424 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 DUX4L6P0CJ89 424 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 DUX4L7P0CJ90 424 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 OR5H8P0DN80 308 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 KCNE1P15382 129 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 HMGA1P17096 107 aaKnown RBP3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 GSTM3P21266 225 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 TUFMP49411 452 aaKnown RBP3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 ETV1P50549 477 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 TRAM2Q15035 370 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 ZNF726P1Q15940 193 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 HES3Q5TGS1 186 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 TTC19Q6DKK2 380 aaPredicted RBP3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 Q6P435 159 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 DUX4L9Q6RFH8 374 aaPredicted RBP3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 ENTHD1Q8IYW4 607 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 BLIDQ8IZY5 108 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 Q8N9L7 120 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 OR10G4Q8NGN3 311 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 OR2A1Q8NGT9 310 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 GPX8Q8TED1 209 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 BMFQ96LC9 184 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 LINC00167Q96N53 147 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 XPO6Q96QU8 1125 aaKnown RBP3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 TPK1Q9H3S4 243 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 CLSTN2Q9H4D0 955 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 ELOVL6Q9H5J4 265 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 DUX4Q9UBX2 424 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 NACAE9PAV3 2078 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 DOCK9Q9BZ29 2069 aa3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 ZFC3H1O60293 1989 aaKnown RBP3.16□□□□□ -1.9
PRPF38A-203ENST00000487160 SPENQ96T58 3664 aaKnown RBP3.15□□□□□ -1.9
PRPF38A-203ENST00000487160 ITPR2Q14571 2701 aa3.15□□□□□ -1.9
PRPF38A-203ENST00000487160 LRP4O75096 1905 aa3.15□□□□□ -1.9
PRPF38A-203ENST00000487160 DOPEY1Q5JWR5 2465 aa3.15□□□□□ -1.9
PRPF38A-203ENST00000487160 SCN8AQ9UQD0 1980 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 KBTBD11-OT1A0A1B0GTJ5 212 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 KRTAP9-6A8MVA2 160 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 INS-IGF2F8WCM5 200 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 SMKR1H3BMG3 65 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 ANGPTL7O43827 346 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 GABARAPO95166 117 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 CD160O95971 181 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 CXCL8P10145 99 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 RAB3BP20337 219 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 OR1E1P30953 314 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 TNFSF9P41273 254 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 ZNF138P52744 262 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 UCNP55089 124 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 DAOAP59103 153 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 DNAJC3Q13217 504 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 CAPRIN1Q14444 709 aaKnown RBP3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 GINS1Q14691 196 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 SDHAF4Q5VUM1 108 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 OR52W1Q6IF63 320 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 TIFABQ6ZNK6 161 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 C12orf56Q8IXR9 622 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 TTC29Q8NA56 475 aaPredicted RBP3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 OR5K2Q8NHB8 316 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 SPPL2BQ8TCT7 592 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 COL21A1Q96P44 957 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 SLC25A2Q9BXI2 301 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 ACTR3CQ9C0K3 210 aaPredicted RBP3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 OR2AG1Q9H205 316 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 NOX3Q9HBY0 568 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms