RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 ST13P4Q8IZP2 240 aaPredicted RBP3.11□□□□□ -1.91
PTCD3-216ENST00000487043 C10orf111Q8N326 155 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 OR2L13Q8N349 312 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 LRRC25Q8N386 305 aaPredicted RBP3.11□□□□□ -1.91
PTCD3-216ENST00000487043 PLPP5Q8NEB5 264 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 OR9A2Q8NGT5 310 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 OR5AK3PQ8NH89 298 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 SFXN5Q8TD22 340 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 ZNF675Q8TD23 568 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 LZICQ8WZA0 190 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 NR4A3Q92570 626 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 TOMM40LQ969M1 308 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 PPWD1Q96BP3 646 aaKnown RBP3.11□□□□□ -1.91
PTCD3-216ENST00000487043 EFHD2Q96C19 240 aaPredicted RBP3.11□□□□□ -1.91
PTCD3-216ENST00000487043 CCDC124Q96CT7 223 aaKnown RBP3.11□□□□□ -1.91
PTCD3-216ENST00000487043 AURKBQ96GD4 344 aaPredicted RBP3.11□□□□□ -1.91
PTCD3-216ENST00000487043 CTRCQ99895 268 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 KCTD14Q9BQ13 255 aaPredicted RBP3.11□□□□□ -1.91
PTCD3-216ENST00000487043 PELOQ9BRX2 385 aaKnown RBP3.11□□□□□ -1.91
PTCD3-216ENST00000487043 CHRDL1Q9BU40 450 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 SLC7A5P2Q9GIP4 190 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 VCXQ9H320 206 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 TMEM38AQ9H6F2 299 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 THUMPD1Q9NXG2 353 aaKnown RBP3.11□□□□□ -1.91
PTCD3-216ENST00000487043 GIN1Q9NXP7 522 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 SLC39A1Q9NY26 324 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 ZNF639Q9UID6 485 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 RIMS3Q9UJD0 308 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 MMACHCQ9Y4U1 282 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 OTOGLQ3ZCN5 2332 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 SPTBP11277 2137 aa3.11□□□□□ -1.91
PTCD3-216ENST00000487043 COL27A1Q8IZC6 1860 aaPredicted RBP3.11□□□□□ -1.91
PTCD3-216ENST00000487043 DNAH14Q0VDD8 3507 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 ZNF292O60281 2723 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 PCNX2A6NKB5 2137 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 CUL9Q8IWT3 2517 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 WDFY4Q6ZS81 3184 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 IGKV3D-15A0A087WSY6 115 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 IGKV3D-11A0A0A0MRZ8 115 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 LOC100131303A0A0U1RQF7 123 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 FRG2CA6NGY1 282 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 M0QX08 132 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 SULT2B1O00204 365 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 HMGN4O00479 90 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 CXCR6O00574 342 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 CXCL13O43927 109 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 PRKYO43930 277 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 OR10H3O60404 316 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 GCM2O75603 506 aaPredicted RBP3.1□□□□□ -1.91
PTCD3-216ENST00000487043 ATP6V1G2O95670 118 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 HMGN2P05204 90 aaKnown RBP3.1□□□□□ -1.91
PTCD3-216ENST00000487043 KLK3P07288 261 aaPredicted RBP3.1□□□□□ -1.91
PTCD3-216ENST00000487043 CT62P0C5K7 136 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 OR12D1P0DN82 309 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 PGAM2P15259 253 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 ATP6V1B2P21281 511 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 MAP3K8P41279 467 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 RPL29P47914 159 aaKnown RBP3.1□□□□□ -1.91
PTCD3-216ENST00000487043 PRKXP51817 358 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 SUCLG1P53597 346 aaKnown RBP3.1□□□□□ -1.91
PTCD3-216ENST00000487043 DSTNP60981 165 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 RPL32P62910 135 aaKnown RBP3.1□□□□□ -1.91
PTCD3-216ENST00000487043 MRPS11P82912 194 aaKnown RBP3.1□□□□□ -1.91
PTCD3-216ENST00000487043 CDK6Q00534 326 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 MRPL28Q13084 256 aaKnown RBP3.1□□□□□ -1.91
PTCD3-216ENST00000487043 RCN1Q15293 331 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 NSDHLQ15738 373 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 TRMT12Q53H54 448 aaKnown RBP3.1□□□□□ -1.91
PTCD3-216ENST00000487043 LIPNQ5VXI9 398 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 REEP3Q6NUK4 255 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 ZFP1Q6P2D0 407 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 TMEM107Q6UX40 140 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 ANGPTL8Q6UXH0 198 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 DGAT2L6Q6ZPD8 337 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 UTS2BQ765I0 119 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 COX15Q7KZN9 410 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 SPATA24Q86W54 205 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 KRTAP7-1Q8IUC3 87 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 TGIF2LXQ8IUE1 241 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 SLC30A8Q8IWU4 369 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 FGFRL1Q8N441 504 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 CDRT4Q8N9R6 151 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 DEFB124Q8NES8 71 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 OR7G2Q8NG99 324 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 OR7G1Q8NGA0 311 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 CANT1Q8WVQ1 401 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 RAB8BQ92930 207 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 STMN2Q93045 179 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 RASD2Q96D21 266 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 SLC35G5Q96KT7 338 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 ZNF578Q96N58 590 aaPredicted RBP3.1□□□□□ -1.91
PTCD3-216ENST00000487043 OR7D2Q96RA2 312 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 OR5M11Q96RB7 305 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 IL4I1Q96RQ9 567 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 TSC22D3Q99576 134 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 DDA1Q9BW61 102 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 UGT2B28Q9BY64 529 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 OR51I1Q9H343 314 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 PIGUQ9H490 435 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 WDR54Q9H977 334 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms