RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 UGT2B28Q9BY64 529 aa2.81□□□□□ -1.96
FN1-222ENST00000485567 HES7Q9BYE0 225 aa2.81□□□□□ -1.96
FN1-222ENST00000485567 MRPS26Q9BYN8 205 aaKnown RBP2.81□□□□□ -1.96
FN1-222ENST00000485567 ULBP1Q9BZM6 244 aa2.81□□□□□ -1.96
FN1-222ENST00000485567 SLC22A4Q9H015 551 aa2.81□□□□□ -1.96
FN1-222ENST00000485567 MFSD1Q9H3U5 465 aa2.81□□□□□ -1.96
FN1-222ENST00000485567 NANOGQ9H9S0 305 aa2.81□□□□□ -1.96
FN1-222ENST00000485567 TMEM27Q9HBJ8 222 aa2.81□□□□□ -1.96
FN1-222ENST00000485567 DAZ3Q9NR90 486 aaKnown RBP2.81□□□□□ -1.96
FN1-222ENST00000485567 CTPS2Q9NRF8 586 aa2.81□□□□□ -1.96
FN1-222ENST00000485567 LGALS13Q9UHV8 139 aa2.81□□□□□ -1.96
FN1-222ENST00000485567 USH1CQ9Y6N9 552 aa2.81□□□□□ -1.96
FN1-222ENST00000485567 RAB3GAP2Q9H2M9 1393 aa2.81□□□□□ -1.96
FN1-222ENST00000485567 RAI1Q7Z5J4 1906 aaPredicted RBP2.81□□□□□ -1.96
FN1-222ENST00000485567 AGRNO00468 2067 aa2.81□□□□□ -1.96
FN1-222ENST00000485567 LRRK1Q38SD2 2015 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 MAPK8IP3Q9UPT6 1336 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 TRAV39A0A0B4J263 110 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 A0A0B4J2A0 478 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 IGKV1D-13A0A0B4J2D9 117 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 CDC7O00311 574 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 CXCR6O00574 342 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 PEX7O00628 323 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 CDIPTO14735 213 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 ERI3O43414 337 aaKnown RBP2.8□□□□□ -1.96
FN1-222ENST00000485567 GCGP01275 180 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 HLA-AP01891 365 aaKnown RBP2.8□□□□□ -1.96
FN1-222ENST00000485567 CTSLP07711 333 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 HOXC4P09017 264 aaPredicted RBP2.8□□□□□ -1.96
FN1-222ENST00000485567 GKN3PP0CG01 181 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 LIMS3P0CW19 117 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 LIMS4P0CW20 117 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 IGKV1-13P0DP09 117 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 ZNF250P15622 560 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 HIST1H1CP16403 213 aaKnown RBP2.8□□□□□ -1.96
FN1-222ENST00000485567 ELK1P19419 428 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 RPS12P25398 132 aaKnown RBP2.8□□□□□ -1.96
FN1-222ENST00000485567 GRPRP30550 384 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 CEACAM6P40199 344 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 CYB561P49447 251 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 RAP1GDS1P52306 607 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 HCCSP53701 268 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 ZNF121P58317 390 aaPredicted RBP2.8□□□□□ -1.96
FN1-222ENST00000485567 TAS2R31P59538 309 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 TAS2R60P59551 318 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 STXBP1P61764 594 aaKnown RBP2.8□□□□□ -1.96
FN1-222ENST00000485567 FAM3AP98173 230 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 SP4Q02446 784 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 UNC119Q13432 240 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 ZNF630Q2M218 657 aaPredicted RBP2.8□□□□□ -1.96
FN1-222ENST00000485567 SPIN3Q5JUX0 258 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 FRMPD2BQ6IN97 320 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 FAM45BPQ6NSW5 357 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 C3orf33Q6P1S2 294 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 LRRN1Q6UXK5 716 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 LYG2Q86SG7 212 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 NT5DC3Q86UY8 548 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 THOC6Q86W42 341 aaKnown RBP2.8□□□□□ -1.96
FN1-222ENST00000485567 BBS7Q8IWZ6 715 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 ATPAF2Q8N5M1 289 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 HSD17B11Q8NBQ5 300 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 OR5AR1Q8NGP9 310 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 OR2V1Q8NHB1 315 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 SDR42E1Q8WUS8 393 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 TMEM54Q969K7 222 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 MED8Q96G25 268 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 SCGB3A2Q96PL1 93 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 NIPSNAP1Q9BPW8 284 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 AGMATQ9BSE5 352 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 NXF2Q9GZY0 626 aaKnown RBP2.8□□□□□ -1.96
FN1-222ENST00000485567 ARL6Q9H0F7 186 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 PDFQ9HBH1 243 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 C6orf50Q9HD87 102 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 XPNPEP1Q9NQW7 623 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 SLC2A9Q9NRM0 540 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 SHPKQ9UHJ6 478 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 GINS2Q9Y248 185 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 ERGIC3Q9Y282 383 aa2.8□□□□□ -1.96
FN1-222ENST00000485567 CEMIPQ8WUJ3 1361 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 TINCRA0A1B0GVN0 87 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 A0A1B0GVY2 172 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 FAM166BA8MTA8 275 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 C2orf74A8MZ97 194 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 DFFAO00273 331 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 NME4O00746 187 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 AZIN1O14977 448 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 RAD1O60671 282 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 CTDNEP1O95476 244 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 SNAP29O95721 258 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 PTTG1O95997 202 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 DHFRP00374 187 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 TYMSP04818 313 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 IFNA16P05015 189 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 ISG15P05161 165 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 CD5P06127 495 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 IGHV4-34P06331 123 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 GIPP09681 153 aaPredicted RBP2.79□□□□□ -1.96
FN1-222ENST00000485567 CSF3P09919 207 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 IGHV3-43DP0DP04 118 aa2.79□□□□□ -1.96
FN1-222ENST00000485567 PSMA1P25786 263 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms