RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 V9GYS6 101 aa13.56□□□□□ -0.24
DDR1-246ENST00000485023 LOC107986453A0A1B0GWG9 222 aa13.55□□□□□ -0.24
DDR1-246ENST00000485023 TRAPPC2LH3BP13 241 aa13.55□□□□□ -0.24
DDR1-246ENST00000485023 CASQ2O14958 399 aaPredicted RBP13.55□□□□□ -0.24
DDR1-246ENST00000485023 ADAM20O43506 726 aa13.55□□□□□ -0.24
DDR1-246ENST00000485023 FADS2O95864 444 aaKnown RBP13.55□□□□□ -0.24
DDR1-246ENST00000485023 ISL1P61371 349 aa13.55□□□□□ -0.24
DDR1-246ENST00000485023 CEACAM21Q3KPI0 293 aa13.55□□□□□ -0.24
DDR1-246ENST00000485023 TTC23Q5W5X9 447 aa13.55□□□□□ -0.24
DDR1-246ENST00000485023 FAM90A1Q86YD7 464 aa13.55□□□□□ -0.24
DDR1-246ENST00000485023 NPRL2Q8WTW4 380 aa13.55□□□□□ -0.24
DDR1-246ENST00000485023 RNF166Q96A37 237 aaPredicted RBP13.55□□□□□ -0.24
DDR1-246ENST00000485023 TECTBQ96PL2 329 aa13.55□□□□□ -0.24
DDR1-246ENST00000485023 ADI1Q9BV57 179 aa13.55□□□□□ -0.24
DDR1-246ENST00000485023 TMPRSS13Q9BYE2 586 aa13.55□□□□□ -0.24
DDR1-246ENST00000485023 TLNRD1Q9H1K6 362 aa13.55□□□□□ -0.24
DDR1-246ENST00000485023 C7orf69Q9H7B7 122 aa13.55□□□□□ -0.24
DDR1-246ENST00000485023 DCLRE1BQ9H816 532 aa13.55□□□□□ -0.24
DDR1-246ENST00000485023 ISG20L2Q9H9L3 353 aaKnown RBP13.55□□□□□ -0.24
DDR1-246ENST00000485023 RNPEPL1Q9HAU8 725 aa13.55□□□□□ -0.24
DDR1-246ENST00000485023 SNTG1Q9NSN8 517 aa13.55□□□□□ -0.24
DDR1-246ENST00000485023 CTSZQ9UBR2 303 aa13.55□□□□□ -0.24
DDR1-246ENST00000485023 RPL36Q9Y3U8 105 aaKnown RBP13.55□□□□□ -0.24
DDR1-246ENST00000485023 TRAV38-1A0A0B4J264 116 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 A8MXK9 166 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 AKR7A2O43488 359 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 RHBDL1O75783 438 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 NRASP01111 189 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 LHBP01229 141 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 IFNA2P01563 188 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 IGHA1P01876 353 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 HTR1AP08908 422 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 GNAO1P09471 354 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 CCL1P22362 96 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 NANOS3P60323 173 aaKnown RBP13.54□□□□□ -0.24
DDR1-246ENST00000485023 ACTA2P62736 377 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 GNG3P63215 75 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 ACTG2P63267 376 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 ADARB1P78563 741 aaKnown RBP13.54□□□□□ -0.24
DDR1-246ENST00000485023 SRSF2Q01130 221 aaKnown RBP13.54□□□□□ -0.24
DDR1-246ENST00000485023 RAB40BQ12829 278 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 KCNJ8Q15842 424 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 CLVS2Q5SYC1 327 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 ZBTB37Q5TC79 503 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 HAGHLQ6PII5 290 aaPredicted RBP13.54□□□□□ -0.24
DDR1-246ENST00000485023 C1orf229Q6ZS94 237 aaPredicted RBP13.54□□□□□ -0.24
DDR1-246ENST00000485023 OR2G2Q8NGZ5 317 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 TRMT10AQ8TBZ6 339 aaKnown RBP13.54□□□□□ -0.24
DDR1-246ENST00000485023 WDR13Q9H1Z4 485 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 RASSF4Q9H2L5 321 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 ERVK13-1Q9NX77 482 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 FRRS1LQ9P0K9 344 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 CLN8Q9UBY8 286 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 CUBNO60494 3623 aa13.54□□□□□ -0.24
DDR1-246ENST00000485023 A0A1B0GW55 424 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 OR5B21A6NL26 309 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.53□□□□□ -0.24
DDR1-246ENST00000485023 FSTL3O95633 263 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 TFF1P04155 84 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 UBCP0CG48 685 aaKnown RBP13.53□□□□□ -0.24
DDR1-246ENST00000485023 DUX4L2P0CJ85 424 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 DUX4L3P0CJ86 424 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 DUX4L4P0CJ87 422 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 DUX4L5P0CJ88 424 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 DUX4L6P0CJ89 424 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 DUX4L7P0CJ90 424 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 SLC34A1Q06495 639 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 GALEQ14376 348 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 DUX4L9Q6RFH8 374 aaPredicted RBP13.53□□□□□ -0.24
DDR1-246ENST00000485023 BATF2Q8N1L9 274 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 SETD9Q8NE22 299 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 OR5T2Q8NGG2 359 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 PELI1Q96FA3 418 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 VCXQ9H320 206 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 OR51I2Q9H344 312 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 SMURF1Q9HCE7 757 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 DUX4Q9UBX2 424 aa13.53□□□□□ -0.24
DDR1-246ENST00000485023 JMJD1CQ15652 2540 aa13.52□□□□□ -0.24
DDR1-246ENST00000485023 ANKRD61A6NGH8 418 aa13.52□□□□□ -0.25
DDR1-246ENST00000485023 J3QLI3 93 aa13.52□□□□□ -0.25
DDR1-246ENST00000485023 TMPRSS2O15393 492 aa13.52□□□□□ -0.25
DDR1-246ENST00000485023 RGS9O75916 674 aaPredicted RBP13.52□□□□□ -0.25
DDR1-246ENST00000485023 CAPGP40121 348 aa13.52□□□□□ -0.25
DDR1-246ENST00000485023 MICBQ29980 383 aa13.52□□□□□ -0.25
DDR1-246ENST00000485023 KLHL22Q53GT1 634 aa13.52□□□□□ -0.25
DDR1-246ENST00000485023 TEX36Q5VZQ5 186 aa13.52□□□□□ -0.25
DDR1-246ENST00000485023 WDR25Q64LD2 544 aaPredicted RBP13.52□□□□□ -0.25
DDR1-246ENST00000485023 KCTD20Q7Z5Y7 419 aa13.52□□□□□ -0.25
DDR1-246ENST00000485023 OR5A2Q8NGI9 324 aa13.52□□□□□ -0.25
DDR1-246ENST00000485023 OR10AC1Q8NH08 325 aa13.52□□□□□ -0.25
DDR1-246ENST00000485023 NRG4Q8WWG1 115 aa13.52□□□□□ -0.25
DDR1-246ENST00000485023 MRPL48Q96GC5 212 aaKnown RBP13.52□□□□□ -0.25
DDR1-246ENST00000485023 ZNF488Q96MN9 340 aa13.52□□□□□ -0.25
DDR1-246ENST00000485023 CCL13Q99616 98 aa13.52□□□□□ -0.25
DDR1-246ENST00000485023 TRIM36Q9NQ86 728 aa13.52□□□□□ -0.25
DDR1-246ENST00000485023 ERVK-18Q9QC07 812 aa13.52□□□□□ -0.25
DDR1-246ENST00000485023 DNAJB11Q9UBS4 358 aa13.52□□□□□ -0.25
DDR1-246ENST00000485023 OPN4Q9UHM6 478 aa13.52□□□□□ -0.25
DDR1-246ENST00000485023 INSIG2Q9Y5U4 225 aa13.52□□□□□ -0.25
DDR1-246ENST00000485023 FAM230AA0A1W2PPH8 454 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms