RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 OPRL1P41146 370 aa2.62□□□□□ -1.99
SMC6-208ENST00000481708 GALR1P47211 349 aa2.62□□□□□ -1.99
SMC6-208ENST00000481708 MLLT11Q13015 90 aaPredicted RBP2.62□□□□□ -1.99
SMC6-208ENST00000481708 EIF3IQ13347 325 aaKnown RBP2.62□□□□□ -1.99
SMC6-208ENST00000481708 TAF1AQ15573 450 aaPredicted RBP2.62□□□□□ -1.99
SMC6-208ENST00000481708 KRTAP15-1Q3LI76 137 aa2.62□□□□□ -1.99
SMC6-208ENST00000481708 TTMPQ5BVD1 217 aa2.62□□□□□ -1.99
SMC6-208ENST00000481708 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.62□□□□□ -1.99
SMC6-208ENST00000481708 OR8G2PQ6IF36 304 aa2.62□□□□□ -1.99
SMC6-208ENST00000481708 RBM23Q86U06 439 aaKnown RBP2.62□□□□□ -1.99
SMC6-208ENST00000481708 ZNF557Q8N988 423 aaPredicted RBP2.62□□□□□ -1.99
SMC6-208ENST00000481708 LFNGQ8NES3 379 aa2.62□□□□□ -1.99
SMC6-208ENST00000481708 PCNPQ8WW12 178 aaKnown RBP2.62□□□□□ -1.99
SMC6-208ENST00000481708 ARPC1AQ92747 370 aa2.62□□□□□ -1.99
SMC6-208ENST00000481708 TMEM80Q96HE8 168 aa2.62□□□□□ -1.99
SMC6-208ENST00000481708 FAM19A4Q96LR4 140 aa2.62□□□□□ -1.99
SMC6-208ENST00000481708 ZNF285Q96NJ3 590 aa2.62□□□□□ -1.99
SMC6-208ENST00000481708 SCGB3A2Q96PL1 93 aa2.62□□□□□ -1.99
SMC6-208ENST00000481708 KRTAP9-3Q9BYQ3 159 aa2.62□□□□□ -1.99
SMC6-208ENST00000481708 CAB39LQ9H9S4 337 aa2.62□□□□□ -1.99
SMC6-208ENST00000481708 ACOT13Q9NPJ3 140 aa2.62□□□□□ -1.99
SMC6-208ENST00000481708 C19orf25Q9UFG5 118 aaPredicted RBP2.62□□□□□ -1.99
SMC6-208ENST00000481708 IGLON5A6NGN9 336 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 RBMXL2O75526 392 aaKnown RBP2.61□□□□□ -1.99
SMC6-208ENST00000481708 IGKV1D-16P01601 117 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 LIMS3P0CW19 117 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 LIMS4P0CW20 117 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 CFL1P23528 166 aaKnown RBP2.61□□□□□ -1.99
SMC6-208ENST00000481708 RND3P61587 244 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 ACVR1Q04771 509 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 TFF3Q07654 80 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 ASAH1Q13510 395 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 TEAD2Q15562 447 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 UBE2SQ16763 222 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 PAN3Q58A45 887 aaKnown RBP2.61□□□□□ -1.99
SMC6-208ENST00000481708 XKRXQ6PP77 449 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 CREB3L2Q70SY1 520 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 ZNF771Q7L3S4 317 aaPredicted RBP2.61□□□□□ -1.99
SMC6-208ENST00000481708 CMC1Q7Z7K0 106 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 RFESDQ8TAC1 157 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 ALKBH3Q96Q83 286 aaPredicted RBP2.61□□□□□ -1.99
SMC6-208ENST00000481708 LXNQ9BS40 222 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 HRASLSQ9HDD0 168 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 RHBDL2Q9NX52 303 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 SLC22A7Q9Y694 548 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 MAST4O15021 2626 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 ZNF816-ZNF321PA0A0X1KG74 233 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 M0QZ92 97 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 CCRL2O00421 344 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 EEDO75530 441 aaKnown RBP2.61□□□□□ -1.99
SMC6-208ENST00000481708 ZFAND5O76080 213 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 LSM8O95777 96 aaKnown RBP2.61□□□□□ -1.99
SMC6-208ENST00000481708 GCGP01275 180 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 FABP1P07148 127 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 ERFP50548 548 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 FABP6P51161 128 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 IDNKQ5T6J7 187 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 C9orf64Q5T6V5 341 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 C1QL2Q7Z5L3 287 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 IFNEQ86WN2 208 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 PLA2G4DQ86XP0 818 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 SLC22A18ASQ8N1D0 253 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 ATPAF2Q8N5M1 289 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 TMEM251Q8N6I4 163 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 DUSP18Q8NEJ0 188 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 NSL1Q96IY1 281 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 ZNF300Q96RE9 604 aaPredicted RBP2.61□□□□□ -1.99
SMC6-208ENST00000481708 TIGARQ9NQ88 270 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 SAMSN1Q9NSI8 373 aaKnown RBP2.61□□□□□ -1.99
SMC6-208ENST00000481708 FBN3Q75N90 2809 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.61□□□□□ -1.99
SMC6-208ENST00000481708 IGLV1-36A0A0B4J1U3 117 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 WDR91A4D1P6 747 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 ANKRD63C9JTQ0 380 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 LOC110117498-PIK3R3F6TDL0 507 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 F6UB75 175 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 SYF2O95926 243 aaKnown RBP2.61□□□□□ -1.99
SMC6-208ENST00000481708 FSHBP01225 129 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 ZNF17P17021 662 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 PSMD7P51665 324 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 NAB1Q13506 487 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 PGGHGQ32M88 737 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 SLC36A2Q495M3 483 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 FRMPD2BQ6IN97 320 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 MED27Q6P2C8 311 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 SFR1Q86XK3 245 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 OR52B6Q8NGF0 335 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 ZNRF4Q8WWF5 429 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 MS4A14Q96JA4 679 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 POM121L2Q96KW2 1035 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 PSMB7Q99436 277 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 METTL8Q9H825 291 aaKnown RBP2.61□□□□□ -1.99
SMC6-208ENST00000481708 PDFQ9HBH1 243 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 HS3ST2Q9Y278 367 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 MMACHCQ9Y4U1 282 aa2.61□□□□□ -1.99
SMC6-208ENST00000481708 BAZ2BQ9UIF8 2168 aaKnown RBP2.61□□□□□ -1.99
SMC6-208ENST00000481708 NF1P21359 2839 aa2.6□□□□□ -1.99
SMC6-208ENST00000481708 SETXQ7Z333 2677 aaKnown RBP2.6□□□□□ -1.99
SMC6-208ENST00000481708 CHD6Q8TD26 2715 aa2.6□□□□□ -1.99
SMC6-208ENST00000481708 ANKRD20A5PA0PJZ0 165 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms