RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 SMPD2O60906 423 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 MPIG6BO95866 241 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 GLI4P10075 376 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 SELEP16581 610 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 PSMB1P20618 241 aaKnown RBP9.5□□□□□ -0.89
VTI1A-204ENST00000480057 CPT2P23786 658 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 HLA-DMAP28067 261 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 RCVRNP35243 200 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 ID4P47928 161 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 TAS2R19P59542 299 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 RNASE12Q5GAN4 147 aaKnown RBP9.5□□□□□ -0.89
VTI1A-204ENST00000480057 RSBN1Q5VWQ0 802 aaPredicted RBP9.5□□□□□ -0.89
VTI1A-204ENST00000480057 PLCXD3Q63HM9 321 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 OR10K2Q6IF99 312 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 GFRALQ6UXV0 394 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 MOB3CQ70IA8 216 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 BTN2A1Q7KYR7 527 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 BHLHA15Q7RTS1 189 aaPredicted RBP9.5□□□□□ -0.89
VTI1A-204ENST00000480057 SSX8Q7RTT4 187 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 RNF144BQ7Z419 303 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 CXorf67Q86X51 503 aaPredicted RBP9.5□□□□□ -0.89
VTI1A-204ENST00000480057 CISD2Q8N5K1 135 aaKnown RBP9.5□□□□□ -0.89
VTI1A-204ENST00000480057 TMEM229BQ8NBD8 167 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 ACBD4Q8NC06 268 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 OR56B2PQ8NGI1 322 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 PIGCQ92535 297 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 WBP1Q96G27 269 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 SPACA5Q96QH8 159 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 CACNG6Q9BXT2 260 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 OPN3Q9H1Y3 402 aaPredicted RBP9.5□□□□□ -0.89
VTI1A-204ENST00000480057 LUZP4Q9P127 313 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 KLK11Q9UBX7 282 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 ING4Q9UNL4 249 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 FAM230AA0A1W2PPH8 454 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 PQLC2LA1A4F0 135 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 OR5B21A6NL26 309 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 ANKRD30BLA7E2S9 258 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 FOXI3A8MTJ6 420 aaPredicted RBP9.49□□□□□ -0.89
VTI1A-204ENST00000480057 INMT-MINDY4F8WBC2 141 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 CRTAPO75718 401 aaPredicted RBP9.49□□□□□ -0.89
VTI1A-204ENST00000480057 DHFRP00374 187 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 NGFP01138 241 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 TCRBP04435 133 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 AKAIN1P0CW23 69 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 TMEM225BP0DP42 221 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 CCL2P13500 99 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 RAC2P15153 192 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 HIST1H1DP16402 221 aaKnown RBP9.49□□□□□ -0.89
VTI1A-204ENST00000480057 MGMTP16455 207 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 TBPP20226 339 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 IL32P24001 234 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 CBX5P45973 191 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 IDH3GP51553 393 aaPredicted RBP9.49□□□□□ -0.89
VTI1A-204ENST00000480057 PPP1CBP62140 327 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 PRDX4Q13162 271 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 CEACAM21Q3KPI0 293 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 MOGAT2Q3SYC2 334 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 CDNFQ49AH0 187 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 SLC22A6Q4U2R8 563 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 TIMM23BQ5SRD1 257 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 Q6ZTK2 550 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 RFPL4BQ6ZWI9 263 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 TMEM200AQ86VY9 491 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 DOLPP1Q86YN1 238 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 ZDHHC23Q8IYP9 409 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 CHST4Q8NCG5 386 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 NAXEQ8NCW5 288 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 TMEM104Q8NE00 496 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 Q8NFD4 153 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 OR5A2Q8NGI9 324 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 NPRL2Q8WTW4 380 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 GCDHQ92947 438 aaPredicted RBP9.49□□□□□ -0.89
VTI1A-204ENST00000480057 UPRTQ96BW1 309 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 SNRNP40Q96DI7 357 aaKnown RBP9.49□□□□□ -0.89
VTI1A-204ENST00000480057 RAB3CQ96E17 227 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 HIST1H2AAQ96QV6 131 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 PAPOLGQ9BWT3 736 aaKnown RBP9.49□□□□□ -0.89
VTI1A-204ENST00000480057 OR10A4Q9H209 315 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 MRPL15Q9P015 296 aaKnown RBP9.49□□□□□ -0.89
VTI1A-204ENST00000480057 ZNF629Q9UEG4 869 aaPredicted RBP9.49□□□□□ -0.89
VTI1A-204ENST00000480057 ANAPC10Q9UM13 185 aa9.49□□□□□ -0.89
VTI1A-204ENST00000480057 URB1O60287 2271 aaKnown RBP9.48□□□□□ -0.89
VTI1A-204ENST00000480057 ACACAQ13085 2346 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 IGKV1-27A0A075B6S5 117 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 FAM90A10PA6NDY2 464 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 FAM90A18PA6NE21 464 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 FAM90A16PA6NEW6 464 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 WIPF3A6NGB9 483 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 HMX3A6NHT5 357 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 FAM90A20PA6NIJ5 464 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 FAM90A8PA6NJQ4 464 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 FAM90A7PA6NKC0 464 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 ZNF850A8MQ14 1090 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 SERPINE3A8MV23 424 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 FAM90A22PA8MWA6 464 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 FAM90A12PA8MX19 464 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 FAM90A5PA8MXJ8 464 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 FAM90A23PA8MXZ1 464 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 MFNGO00587 321 aa9.48□□□□□ -0.89
VTI1A-204ENST00000480057 TPD52L2O43399 206 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms