RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 NANOS3P60323 173 aaKnown RBP17.19■□□□□ 0.34
VARS-224ENST00000479051 ZNF404Q494X3 552 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 TMEM42Q69YG0 159 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 IZUMO2Q6UXV1 221 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 ZNF826PQ6ZT77 177 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 NLRC3Q7RTR2 1065 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 ZNF676Q8N7Q3 588 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 BPIFB6Q8NFQ5 453 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 LRRC29Q8WV35 223 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 GGHQ92820 318 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 TECTBQ96PL2 329 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 ZNF649Q9BS31 505 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 COMMD4Q9H0A8 199 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 LPAR2Q9HBW0 351 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 TMEM165Q9HC07 324 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 MIOXQ9UGB7 285 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 HHLA2Q9UM44 414 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.18■□□□□ 0.343e-7■■■■■ 31.9
VARS-224ENST00000479051 ANKRD61A6NGH8 418 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 TMEM212A6NML5 194 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 CEACAM18A8MTB9 384 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 H3BSH0 61 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 CDIPTO14735 213 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 FOXH1O75593 365 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 RPS2P15880 293 aaKnown RBP17.18■□□□□ 0.34
VARS-224ENST00000479051 TGM4P49221 684 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 ETV1P50549 477 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 ST3GAL4Q11206 333 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 FAM76BQ5HYJ3 339 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 FAM201AQ5SY85 155 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 WDR82Q6UXN9 313 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 RDH10Q8IZV5 341 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 STX19Q8N4C7 294 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 OR10Z1Q8NGY1 313 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 RNF166Q96A37 237 aaPredicted RBP17.18■□□□□ 0.34
VARS-224ENST00000479051 TMEM186Q96B77 213 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 TMEM246Q9BRR3 403 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 GPR173Q9NS66 373 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 LPAR3Q9UBY5 353 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 SLC7A11Q9UPY5 501 aa17.18■□□□□ 0.34
VARS-224ENST00000479051 OOEPA6NGQ2 149 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 OR4C45A6NMZ5 311 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 ZNF20P17024 532 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 HNF1AP20823 631 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 CD80P33681 288 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 CFHR2P36980 270 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 CCDC58Q4VC31 144 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 ESCO2Q56NI9 601 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 DCDC5Q6ZRR9 648 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 AHSA2Q719I0 299 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 C11orf53Q8IXP5 236 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 GCSAMQ8N6F7 178 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 SCCPDHQ8NBX0 429 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 DEFB108BQ8NET1 73 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 OR8B3Q8NGG8 313 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 PP6455Q8WZ26 134 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 RPL3LQ92901 407 aaKnown RBP17.17■□□□□ 0.34
VARS-224ENST00000479051 OR8B2Q96RD0 313 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 HIF1ANQ9NWT6 349 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 SCN3BQ9NY72 215 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 PSORS1C1Q9UIG5 152 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 CDC42EP3Q9UKI2 254 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 LRCH1Q9Y2L9 728 aa17.17■□□□□ 0.34
VARS-224ENST00000479051 NSD1Q96L73 2696 aaPredicted RBP17.17■□□□□ 0.34
VARS-224ENST00000479051 A6NIN4 97 aa17.16■□□□□ 0.34
VARS-224ENST00000479051 C3orf80F5H4A9 247 aa17.16■□□□□ 0.34
VARS-224ENST00000479051 NDUFA2O43678 99 aa17.16■□□□□ 0.34
VARS-224ENST00000479051 XPNPEP2O43895 674 aa17.16■□□□□ 0.34
VARS-224ENST00000479051 VHLP40337 213 aa17.16■□□□□ 0.34
VARS-224ENST00000479051 SFRP4Q6FHJ7 346 aaPredicted RBP17.16■□□□□ 0.34
VARS-224ENST00000479051 ZNF573Q86YE8 665 aa17.16■□□□□ 0.34
VARS-224ENST00000479051 OR52N1Q8NH53 320 aa17.16■□□□□ 0.34
VARS-224ENST00000479051 OR5AK2Q8NH90 309 aa17.16■□□□□ 0.34
VARS-224ENST00000479051 ZNF671Q8TAW3 534 aa17.16■□□□□ 0.34
VARS-224ENST00000479051 NEIL1Q96FI4 390 aaPredicted RBP17.16■□□□□ 0.34
VARS-224ENST00000479051 ANKRD60Q9BZ19 345 aa17.16■□□□□ 0.34
VARS-224ENST00000479051 CHST5Q9GZS9 411 aa17.16■□□□□ 0.34
VARS-224ENST00000479051 SHARPINQ9H0F6 387 aa17.16■□□□□ 0.34
VARS-224ENST00000479051 OR51I2Q9H344 312 aa17.16■□□□□ 0.34
VARS-224ENST00000479051 METTL17Q9H7H0 456 aaPredicted RBP17.16■□□□□ 0.34
VARS-224ENST00000479051 RRP15Q9Y3B9 282 aaKnown RBP17.16■□□□□ 0.34
VARS-224ENST00000479051 TRBV2A0A0J9YWF9 115 aa17.15■□□□□ 0.34
VARS-224ENST00000479051 F5H0A9 414 aaPredicted RBP17.15■□□□□ 0.34
VARS-224ENST00000479051 MYL12BO14950 172 aa17.15■□□□□ 0.34
VARS-224ENST00000479051 PLPP2O43688 288 aa17.15■□□□□ 0.34
VARS-224ENST00000479051 LHBP01229 141 aa17.15■□□□□ 0.34
VARS-224ENST00000479051 MUC1P15941 1255 aaPredicted RBP17.15■□□□□ 0.34
VARS-224ENST00000479051 MYF6P23409 242 aa17.15■□□□□ 0.34
VARS-224ENST00000479051 CNN3Q15417 329 aaKnown RBP17.15■□□□□ 0.34
VARS-224ENST00000479051 MICBQ29980 383 aa17.15■□□□□ 0.34
VARS-224ENST00000479051 CHRFAM7AQ494W8 412 aa17.15■□□□□ 0.34
VARS-224ENST00000479051 C6orf141Q5SZD1 244 aa17.15■□□□□ 0.34
VARS-224ENST00000479051 OR2G6Q5TZ20 316 aa17.15■□□□□ 0.34
VARS-224ENST00000479051 LAIR2Q6ISS4 152 aa17.15■□□□□ 0.34
VARS-224ENST00000479051 RPL22L1Q6P5R6 122 aaKnown RBP17.15■□□□□ 0.34
VARS-224ENST00000479051 C19orf18Q8NEA5 215 aa17.15■□□□□ 0.34
VARS-224ENST00000479051 OR13C3Q8NGS6 347 aa17.15■□□□□ 0.34
VARS-224ENST00000479051 BEX2Q9BXY8 128 aa17.15■□□□□ 0.34
VARS-224ENST00000479051 FGF23Q9GZV9 251 aaPredicted RBP17.15■□□□□ 0.34
VARS-224ENST00000479051 BABAM2Q9NXR7 383 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms