RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 B9D2Q9BPU9 175 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 SLIRPQ9GZT3 109 aaKnown RBP0.21□□□□□ -2.38
HPS3-205ENST00000478525 MFSD1Q9H3U5 465 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 TMEM38AQ9H6F2 299 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 RAB18Q9NP72 206 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 PRSS16Q9NQE7 514 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 AGPAT4Q9NRZ5 378 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 DDX18Q9NVP1 670 aaKnown RBP0.21□□□□□ -2.38
HPS3-205ENST00000478525 DOK5Q9P104 306 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 PTBP2Q9UKA9 531 aaKnown RBP0.21□□□□□ -2.38
HPS3-205ENST00000478525 SLC7A11Q9UPY5 501 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 TRPM6Q9BX84 2022 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 RPRD2Q5VT52 1461 aaKnown RBP0.21□□□□□ -2.38
HPS3-205ENST00000478525 PTPRKQ15262 1439 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 DLG5Q8TDM6 1919 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 LAMB4A4D0S4 1761 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 KMT2DO14686 5537 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 MYH11P35749 1972 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 TRGV2A0A075B6R0 118 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 IGHV3-21A0A0B4J1V1 117 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 IGKV1-8A0A0C4DH67 115 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 TRBV11-1A0A0K0K1C0 115 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 A0A1B0GTI1 187 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 A0A1B0GU33 70 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 A0A1W2PNM2 257 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 A0A1W2PPV9 198 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 A0A1W2PQL4 384 aaPredicted RBP0.2□□□□□ -2.38
HPS3-205ENST00000478525 BTBD17A6NE02 478 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 SMCO2A6NFE2 343 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 F5H5T6 163 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 H0Y8G0 127 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 H0YCG3 227 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 H3BRN7 92 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 K7EMT4 169 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 PLPP1O14494 284 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 TCAPO15273 167 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 NMT2O60551 498 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 SLC16A7O60669 478 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 PSIP1O75475 530 aaKnown RBP0.2□□□□□ -2.38
HPS3-205ENST00000478525 CLDN11O75508 207 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 CTAG2O75638 210 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 POP7O75817 140 aaKnown RBP0.2□□□□□ -2.38
HPS3-205ENST00000478525 LSM8O95777 96 aaKnown RBP0.2□□□□□ -2.38
HPS3-205ENST00000478525 AGTP01019 485 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 IFNB1P01574 187 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 HBE1P02100 147 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 GZMBP10144 247 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 ETS2P15036 469 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 DESP17661 470 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 CRABP2P29373 138 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 PPICP45877 212 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 TUFMP49411 452 aaKnown RBP0.2□□□□□ -2.38
HPS3-205ENST00000478525 SULT1E1P49888 294 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 RELAQ04206 551 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 RCAN2Q14206 197 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 CASP8Q14790 479 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 KRTAP25-1Q3LHN0 102 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 C22orf42Q6IC83 251 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 REEP3Q6NUK4 255 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 CENPQQ7L2Z9 268 aaPredicted RBP0.2□□□□□ -2.38
HPS3-205ENST00000478525 SLC16A14Q7RTX9 510 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 CDH26Q8IXH8 852 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 AMN1Q8IY45 258 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 ZNF567Q8N184 647 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 SLC25A45Q8N413 288 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 JAGN1Q8N5M9 183 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 PRELID2Q8N945 189 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 ZDHHC22Q8N966 263 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 TTC29Q8NA56 475 aaPredicted RBP0.2□□□□□ -2.38
HPS3-205ENST00000478525 OR7G2Q8NG99 324 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 OR4C5Q8NGB2 326 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 OR4A4PQ8NGN8 299 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 OR10Z1Q8NGY1 313 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 OR4X1Q8NH49 305 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 OR5K2Q8NHB8 316 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 C10orf105Q8TEF2 133 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 GHSRQ92847 366 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 SLC38A4Q969I6 547 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 ECHDC3Q96DC8 303 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 DTNBP1Q96EV8 351 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 SMARCD1Q96GM5 515 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 RDH12Q96NR8 316 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 OR8B2Q96RD0 313 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 PLIN2Q99541 437 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 ZBTB18Q99592 522 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 GABRG3Q99928 467 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 CENPKQ9BS16 269 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 THTPAQ9BU02 230 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 TTTY12Q9BZ98 90 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 BCL2L14Q9BZR8 327 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 ZYG11BQ9C0D3 744 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 CXCL16Q9H2A7 254 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 VCX2Q9H322 139 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 WDR55Q9H6Y2 383 aaPredicted RBP0.2□□□□□ -2.38
HPS3-205ENST00000478525 VSIRQ9H7M9 311 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 PLEKHF2Q9H8W4 249 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 TMEM165Q9HC07 324 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 ZNF160Q9HCG1 818 aa0.2□□□□□ -2.38
HPS3-205ENST00000478525 FGF20Q9NP95 211 aaPredicted RBP0.2□□□□□ -2.38
HPS3-205ENST00000478525 ACP6Q9NPH0 428 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms