RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 ZFP1Q6P2D0 407 aa19.39■□□□□ 0.69
C9orf3-215ENST00000478473 SLC36A1Q7Z2H8 476 aa19.39■□□□□ 0.69
C9orf3-215ENST00000478473 LY6G5BQ8NDX9 201 aa19.39■□□□□ 0.69
C9orf3-215ENST00000478473 TRUB1Q8WWH5 349 aaKnown RBP19.39■□□□□ 0.69
C9orf3-215ENST00000478473 PYDC1Q8WXC3 89 aa19.39■□□□□ 0.69
C9orf3-215ENST00000478473 RPL3LQ92901 407 aaKnown RBP19.39■□□□□ 0.69
C9orf3-215ENST00000478473 PPP1R14AQ96A00 147 aa19.39■□□□□ 0.69
C9orf3-215ENST00000478473 APOL4Q9BPW4 351 aa19.39■□□□□ 0.69
C9orf3-215ENST00000478473 SIRPDQ9H106 197 aa19.39■□□□□ 0.69
C9orf3-215ENST00000478473 ZNF670-ZNF695F2Z2N8 137 aa19.38■□□□□ 0.69
C9orf3-215ENST00000478473 LOC110117498-PIK3R3F6TDL0 507 aa19.38■□□□□ 0.69
C9orf3-215ENST00000478473 MTRF1O75570 445 aaKnown RBP19.38■□□□□ 0.69
C9orf3-215ENST00000478473 OR2T7P0C7T2 308 aa19.38■□□□□ 0.69
C9orf3-215ENST00000478473 SLC25A30Q5SVS4 291 aa19.38■□□□□ 0.69
C9orf3-215ENST00000478473 OR2T27Q8NH04 317 aa19.38■□□□□ 0.69
C9orf3-215ENST00000478473 FAM81AQ8TBF8 368 aa19.38■□□□□ 0.69
C9orf3-215ENST00000478473 HIST1H2AAQ96QV6 131 aa19.38■□□□□ 0.69
C9orf3-215ENST00000478473 TBX15Q96SF7 602 aa19.38■□□□□ 0.69
C9orf3-215ENST00000478473 RASSF4Q9H2L5 321 aa19.38■□□□□ 0.69
C9orf3-215ENST00000478473 RPUSD1Q9UJJ7 312 aaKnown RBP19.38■□□□□ 0.69
C9orf3-215ENST00000478473 V9GYS6 101 aa19.38■□□□□ 0.69
C9orf3-215ENST00000478473 A0A1B0GTI1 187 aa19.37■□□□□ 0.69
C9orf3-215ENST00000478473 CCL1P22362 96 aa19.37■□□□□ 0.69
C9orf3-215ENST00000478473 ACTG1P63261 375 aa19.37■□□□□ 0.69
C9orf3-215ENST00000478473 C12orf54Q6X4T0 127 aa19.37■□□□□ 0.69
C9orf3-215ENST00000478473 ZNF788Q6ZQV5 615 aa19.37■□□□□ 0.69
C9orf3-215ENST00000478473 BTN2A1Q7KYR7 527 aa19.37■□□□□ 0.69
C9orf3-215ENST00000478473 OR51G2Q8NGK0 314 aa19.37■□□□□ 0.69
C9orf3-215ENST00000478473 ANGPTL6Q8NI99 470 aa19.37■□□□□ 0.69
C9orf3-215ENST00000478473 EME1Q96AY2 570 aa19.37■□□□□ 0.69
C9orf3-215ENST00000478473 SEH1LQ96EE3 360 aa19.37■□□□□ 0.69
C9orf3-215ENST00000478473 HRASLS5Q96KN8 279 aa19.37■□□□□ 0.69
C9orf3-215ENST00000478473 WDFY2Q96P53 400 aa19.37■□□□□ 0.69
C9orf3-215ENST00000478473 CCL13Q99616 98 aa19.37■□□□□ 0.69
C9orf3-215ENST00000478473 WDR13Q9H1Z4 485 aa19.37■□□□□ 0.69
C9orf3-215ENST00000478473 ENPP5Q9UJA9 477 aa19.37■□□□□ 0.69
C9orf3-215ENST00000478473 SNX5Q9Y5X3 404 aa19.37■□□□□ 0.69
C9orf3-215ENST00000478473 DNAJC9-AS1A6NH13 148 aa19.36■□□□□ 0.69
C9orf3-215ENST00000478473 SULT1C4O75897 302 aa19.36■□□□□ 0.69
C9orf3-215ENST00000478473 RNASE1P07998 156 aaKnown RBP19.36■□□□□ 0.69
C9orf3-215ENST00000478473 GPM6AP51674 278 aa19.36■□□□□ 0.69
C9orf3-215ENST00000478473 KPNB1Q14974 876 aaKnown RBP19.36■□□□□ 0.69
C9orf3-215ENST00000478473 CCDC121Q6ZUS5 278 aa19.36■□□□□ 0.69
C9orf3-215ENST00000478473 SSX6Q7RTT6 188 aa19.36■□□□□ 0.69
C9orf3-215ENST00000478473 C8orf46Q8TAG6 207 aa19.36■□□□□ 0.69
C9orf3-215ENST00000478473 GCDHQ92947 438 aaPredicted RBP19.36■□□□□ 0.69
C9orf3-215ENST00000478473 RFKQ969G6 155 aa19.36■□□□□ 0.69
C9orf3-215ENST00000478473 FAM71F1Q96KD3 344 aaPredicted RBP19.36■□□□□ 0.69
C9orf3-215ENST00000478473 TTTY10Q9BZA0 68 aa19.36■□□□□ 0.69
C9orf3-215ENST00000478473 RIBC2Q9H4K1 309 aa19.36■□□□□ 0.69
C9orf3-215ENST00000478473 OR52A1Q9UKL2 312 aa19.36■□□□□ 0.69
C9orf3-215ENST00000478473 KPTNQ9Y664 436 aa19.36■□□□□ 0.69
C9orf3-215ENST00000478473 A0A1B0GW55 424 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 SAC3D1A6NKF1 404 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 ZNF732B4DXR9 585 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 MAGEB4O15481 346 aaPredicted RBP19.35■□□□□ 0.69
C9orf3-215ENST00000478473 DUX4L2P0CJ85 424 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 DUX4L3P0CJ86 424 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 DUX4L4P0CJ87 422 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 DUX4L5P0CJ88 424 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 DUX4L6P0CJ89 424 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 DUX4L7P0CJ90 424 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 HKR1P10072 659 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 ISL1P61371 349 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 ELF3P78545 371 aaPredicted RBP19.35■□□□□ 0.69
C9orf3-215ENST00000478473 PDCD1Q15116 288 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 GPR157Q5UAW9 335 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 DUX4L9Q6RFH8 374 aaPredicted RBP19.35■□□□□ 0.69
C9orf3-215ENST00000478473 THAP5Q7Z6K1 395 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 C10orf67Q8IYJ2 551 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 OR14K1Q8NGZ2 314 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 AQP3Q92482 292 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 CNTD2Q9H8S5 307 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 DUX4Q9UBX2 424 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 PIGLQ9Y2B2 252 aa19.35■□□□□ 0.69
C9orf3-215ENST00000478473 IGHV3OR16-10A0A075B7F0 116 aa19.34■□□□□ 0.69
C9orf3-215ENST00000478473 CENPVL3A0A0U1RRI6 287 aa19.34■□□□□ 0.69
C9orf3-215ENST00000478473 A0A1W2PQL4 384 aaPredicted RBP19.34■□□□□ 0.69
C9orf3-215ENST00000478473 DLGAP1O14490 977 aa19.34■□□□□ 0.69
C9orf3-215ENST00000478473 TOX4O94842 621 aa19.34■□□□□ 0.69
C9orf3-215ENST00000478473 SFTPBP07988 381 aa19.34■□□□□ 0.69
C9orf3-215ENST00000478473 FAHP16930 419 aa19.34■□□□□ 0.69
C9orf3-215ENST00000478473 CFPP27918 469 aa19.34■□□□□ 0.69
C9orf3-215ENST00000478473 CDC42P60953 191 aa19.34■□□□□ 0.69
C9orf3-215ENST00000478473 BAMBIQ13145 260 aa19.34■□□□□ 0.69
C9orf3-215ENST00000478473 CEP78Q5JTW2 689 aa19.34■□□□□ 0.69
C9orf3-215ENST00000478473 BCL2L15Q5TBC7 163 aa19.34■□□□□ 0.69
C9orf3-215ENST00000478473 KCTD8Q6ZWB6 473 aa19.34■□□□□ 0.69
C9orf3-215ENST00000478473 FAM216BQ8N7L0 139 aa19.34■□□□□ 0.69
C9orf3-215ENST00000478473 ZNF671Q8TAW3 534 aa19.34■□□□□ 0.69
C9orf3-215ENST00000478473 MED30Q96HR3 178 aa19.34■□□□□ 0.69
C9orf3-215ENST00000478473 ZNF222Q9UK12 451 aa19.34■□□□□ 0.69
C9orf3-215ENST00000478473 SOX21Q9Y651 276 aaPredicted RBP19.34■□□□□ 0.69
C9orf3-215ENST00000478473 AKR7A2O43488 359 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 NDUFB3O43676 98 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 NOS1APO75052 506 aaPredicted RBP19.33■□□□□ 0.68
C9orf3-215ENST00000478473 RHBDL1O75783 438 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 NRASP01111 189 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 KRT8P05787 483 aa19.33■□□□□ 0.68
C9orf3-215ENST00000478473 ALDH3A2P51648 485 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms