RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 ZNF684Q5T5D7 378 aa18.02■□□□□ 0.48
COL9A3-211ENST00000477612 STUMQ69YW2 141 aa18.02■□□□□ 0.48
COL9A3-211ENST00000477612 SSX6Q7RTT6 188 aa18.02■□□□□ 0.48
COL9A3-211ENST00000477612 C10orf67Q8IYJ2 551 aa18.02■□□□□ 0.48
COL9A3-211ENST00000477612 SIGLECL1Q8N7X8 197 aa18.02■□□□□ 0.48
COL9A3-211ENST00000477612 PNLDC1Q8NA58 520 aaKnown RBP18.02■□□□□ 0.48
COL9A3-211ENST00000477612 MS4A7Q9GZW8 240 aaPredicted RBP18.02■□□□□ 0.48
COL9A3-211ENST00000477612 OR51I2Q9H344 312 aa18.02■□□□□ 0.48
COL9A3-211ENST00000477612 OR52A1Q9UKL2 312 aa18.02■□□□□ 0.48
COL9A3-211ENST00000477612 SNX5Q9Y5X3 404 aa18.02■□□□□ 0.48
COL9A3-211ENST00000477612 FBN3Q75N90 2809 aa18.02■□□□□ 0.47
COL9A3-211ENST00000477612 TRAV40A0A0B4J280 105 aa18.01■□□□□ 0.47
COL9A3-211ENST00000477612 A0A1B0GTI1 187 aa18.01■□□□□ 0.47
COL9A3-211ENST00000477612 OR5B21A6NL26 309 aa18.01■□□□□ 0.47
COL9A3-211ENST00000477612 GPR37O15354 613 aa18.01■□□□□ 0.47
COL9A3-211ENST00000477612 CDC42P60953 191 aa18.01■□□□□ 0.47
COL9A3-211ENST00000477612 FGF12P61328 243 aa18.01■□□□□ 0.47
COL9A3-211ENST00000477612 SLC25A30Q5SVS4 291 aa18.01■□□□□ 0.47
COL9A3-211ENST00000477612 TMEM42Q69YG0 159 aa18.01■□□□□ 0.47
COL9A3-211ENST00000477612 RBMS3Q6XE24 437 aaKnown RBP18.01■□□□□ 0.47
COL9A3-211ENST00000477612 SLC36A1Q7Z2H8 476 aa18.01■□□□□ 0.47
COL9A3-211ENST00000477612 THAP5Q7Z6K1 395 aa18.01■□□□□ 0.47
COL9A3-211ENST00000477612 RFKQ969G6 155 aa18.01■□□□□ 0.47
COL9A3-211ENST00000477612 SEH1LQ96EE3 360 aa18.01■□□□□ 0.47
COL9A3-211ENST00000477612 FAM71F1Q96KD3 344 aaPredicted RBP18.01■□□□□ 0.47
COL9A3-211ENST00000477612 RAB3IPQ96QF0 476 aaPredicted RBP18.01■□□□□ 0.47
COL9A3-211ENST00000477612 CCL13Q99616 98 aa18.01■□□□□ 0.47
COL9A3-211ENST00000477612 PRDM13Q9H4Q3 707 aa18.01■□□□□ 0.47
COL9A3-211ENST00000477612 ENPP5Q9UJA9 477 aa18.01■□□□□ 0.47
COL9A3-211ENST00000477612 V9GYS6 101 aa18.01■□□□□ 0.47
COL9A3-211ENST00000477612 DHRS7CA6NNS2 312 aa18■□□□□ 0.47
COL9A3-211ENST00000477612 P2RY10O00398 339 aa18■□□□□ 0.47
COL9A3-211ENST00000477612 SULT1C4O75897 302 aa18■□□□□ 0.47
COL9A3-211ENST00000477612 CCL1P22362 96 aa18■□□□□ 0.47
COL9A3-211ENST00000477612 ALDH3A2P51648 485 aa18■□□□□ 0.47
COL9A3-211ENST00000477612 GPM6AP51674 278 aa18■□□□□ 0.47
COL9A3-211ENST00000477612 ELF3P78545 371 aaPredicted RBP18■□□□□ 0.47
COL9A3-211ENST00000477612 ZNF788Q6ZQV5 615 aa18■□□□□ 0.47
COL9A3-211ENST00000477612 KCTD8Q6ZWB6 473 aa18■□□□□ 0.47
COL9A3-211ENST00000477612 BTN2A1Q7KYR7 527 aa18■□□□□ 0.47
COL9A3-211ENST00000477612 LY6G5BQ8NDX9 201 aa18■□□□□ 0.47
COL9A3-211ENST00000477612 OR14K1Q8NGZ2 314 aa18■□□□□ 0.47
COL9A3-211ENST00000477612 C1orf147Q96MC9 270 aaPredicted RBP18■□□□□ 0.47
COL9A3-211ENST00000477612 SIRPDQ9H106 197 aa18■□□□□ 0.47
COL9A3-211ENST00000477612 WDR13Q9H1Z4 485 aa18■□□□□ 0.47
COL9A3-211ENST00000477612 ZMAT3Q9HA38 289 aaKnown RBP18■□□□□ 0.47
COL9A3-211ENST00000477612 PIGLQ9Y2B2 252 aa18■□□□□ 0.47
COL9A3-211ENST00000477612 TENM1Q9UKZ4 2725 aa18■□□□□ 0.47
COL9A3-211ENST00000477612 A0A1W2PQL4 384 aaPredicted RBP17.99■□□□□ 0.47
COL9A3-211ENST00000477612 ZNF732B4DXR9 585 aa17.99■□□□□ 0.47
COL9A3-211ENST00000477612 EBAG9O00559 213 aa17.99■□□□□ 0.47
COL9A3-211ENST00000477612 EI24O14681 340 aa17.99■□□□□ 0.47
COL9A3-211ENST00000477612 KRT8P05787 483 aa17.99■□□□□ 0.47
COL9A3-211ENST00000477612 FAHP16930 419 aa17.99■□□□□ 0.47
COL9A3-211ENST00000477612 PRTN3P24158 256 aa17.99■□□□□ 0.47
COL9A3-211ENST00000477612 MTNR1AP48039 350 aa17.99■□□□□ 0.47
COL9A3-211ENST00000477612 CEP78Q5JTW2 689 aa17.99■□□□□ 0.47
COL9A3-211ENST00000477612 BCL2L15Q5TBC7 163 aa17.99■□□□□ 0.47
COL9A3-211ENST00000477612 PLEKHG7Q6ZR37 379 aa17.99■□□□□ 0.47
COL9A3-211ENST00000477612 COMMD2Q86X83 199 aa17.99■□□□□ 0.47
COL9A3-211ENST00000477612 WDFY2Q96P53 400 aa17.99■□□□□ 0.47
COL9A3-211ENST00000477612 RPUSD1Q9UJJ7 312 aaKnown RBP17.99■□□□□ 0.47
COL9A3-211ENST00000477612 A0A1B0GW55 424 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 METTL15A6NJ78 407 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 CLDN34H7C241 214 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 DLGAP1O14490 977 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 AKR7A2O43488 359 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 RHBDL1O75783 438 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 NRASP01111 189 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 DUX4L2P0CJ85 424 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 DUX4L3P0CJ86 424 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 DUX4L4P0CJ87 422 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 DUX4L5P0CJ88 424 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 DUX4L6P0CJ89 424 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 DUX4L7P0CJ90 424 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 ISL1P61371 349 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 SNRPGP62308 76 aaKnown RBP17.98■□□□□ 0.47
COL9A3-211ENST00000477612 DUX4L9Q6RFH8 374 aaPredicted RBP17.98■□□□□ 0.47
COL9A3-211ENST00000477612 MOB3CQ70IA8 216 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 CATSPERDQ86XM0 798 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 YIPF7Q8N8F6 280 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 ANGPTL6Q8NI99 470 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 ZNF671Q8TAW3 534 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 AQP3Q92482 292 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 UBE2FQ969M7 185 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 TBX15Q96SF7 602 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 TBX5Q99593 518 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 CNTD2Q9H8S5 307 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 DUX4Q9UBX2 424 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.98■□□□□ 0.47
COL9A3-211ENST00000477612 ORC6Q9Y5N6 252 aa17.98■□□□□ 0.47
COL9A3-211ENST00000477612 IGHV3OR16-10A0A075B7F0 116 aa17.97■□□□□ 0.47
COL9A3-211ENST00000477612 TOX4O94842 621 aa17.97■□□□□ 0.47
COL9A3-211ENST00000477612 GLRA1P23415 457 aa17.97■□□□□ 0.47
COL9A3-211ENST00000477612 ACTG1P63261 375 aa17.97■□□□□ 0.47
COL9A3-211ENST00000477612 OCLNQ16625 522 aa17.97■□□□□ 0.47
COL9A3-211ENST00000477612 CLVS2Q5SYC1 327 aa17.97■□□□□ 0.47
COL9A3-211ENST00000477612 GPR157Q5UAW9 335 aa17.97■□□□□ 0.47
COL9A3-211ENST00000477612 C12orf54Q6X4T0 127 aa17.97■□□□□ 0.47
COL9A3-211ENST00000477612 OR5T2Q8NGG2 359 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms