RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 FANCFQ9NPI8 374 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 IGLV1-36A0A0B4J1U3 117 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 MED19A0JLT2 244 aaPredicted RBP9.76□□□□□ -0.85
COL27A1-204ENST00000477421 HSD17B6O14756 317 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 YKT6O15498 198 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 LYPD3O95274 346 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 TUBG1P23258 451 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 CLN3Q13286 438 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 GCNT2Q8N0V5 402 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 FAM213BQ8TBF2 198 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 NANOS1Q8WY41 292 aaKnown RBP9.76□□□□□ -0.85
COL27A1-204ENST00000477421 MS4A3Q96HJ5 214 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 GPX7Q96SL4 187 aaPredicted RBP9.76□□□□□ -0.85
COL27A1-204ENST00000477421 UCK1Q9HA47 277 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 KCNIP1Q9NZI2 227 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 COLQQ9Y215 455 aaPredicted RBP9.76□□□□□ -0.85
COL27A1-204ENST00000477421 FLVCR1Q9Y5Y0 555 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 IGKV1D-43A0A0B4J1Z2 117 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 LOC101059948A0A1B0GTJ6 334 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 MS4A18H0YCH9 400 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 IGF2P01344 180 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 ZNF14P17017 642 aaPredicted RBP9.76□□□□□ -0.85
COL27A1-204ENST00000477421 MPLP40238 635 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 PIGPP57054 158 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 IGLV3-21P80748 117 aaPredicted RBP9.76□□□□□ -0.85
COL27A1-204ENST00000477421 MS4A18Q3C1V0 323 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 COL13A1Q5TAT6 717 aaPredicted RBP9.76□□□□□ -0.85
COL27A1-204ENST00000477421 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.76□□□□□ -0.85
COL27A1-204ENST00000477421 ZBTB44Q8NCP5 570 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 ABHD3Q8WU67 409 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 RNF133Q8WVZ7 376 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 NARFLQ9H6Q4 476 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 CTDSPLO15194 276 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 FKBP2P26885 142 aaKnown RBP9.75□□□□□ -0.85
COL27A1-204ENST00000477421 MMP16P51512 607 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 TMEM128Q5BJH2 165 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 TSPO2Q5TGU0 170 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 PRSS42Q7Z5A4 293 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 TMEM200AQ86VY9 491 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 LILRB2Q8N423 598 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 OR2Y1Q8NGV0 311 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 OR2V1Q8NHB1 315 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 RNF141Q8WVD5 230 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 RTN4IP1Q8WWV3 396 aaPredicted RBP9.75□□□□□ -0.85
COL27A1-204ENST00000477421 LRRC46Q96FV0 321 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 CXorf58Q96LI9 332 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 C20orf24Q9BUV8 137 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 NMNAT2Q9BZQ4 307 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 HELZP42694 1942 aaKnown RBP9.75□□□□□ -0.85
COL27A1-204ENST00000477421 A0A1W2PPC1 479 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 PRKACAP17612 351 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 PLPPR5Q32ZL2 321 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 AKR1C8PQ5T2L2 129 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 AADACL3Q5VUY0 350 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 CLEC9AQ6UXN8 241 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 ZNF485Q8NCK3 441 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 OR2M3Q8NG83 312 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 AIFM2Q9BRQ8 373 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 ZNF649Q9BS31 505 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 KCNJ16Q9NPI9 418 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 NECAP2Q9NVZ3 263 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 FANCMQ8IYD8 2048 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 SIGLEC5O15389 551 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 NXPH2O95156 264 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 IGHEP01854 428 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 CD63P08962 238 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 GSTP1P09211 210 aaKnown RBP9.75□□□□□ -0.85
COL27A1-204ENST00000477421 IL2RGP31785 369 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 SIGLEC14Q08ET2 396 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 C11orf87Q6NUJ2 197 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 LPCAT3Q6P1A2 487 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 PLXDC2Q6UX71 529 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 APCDD1LQ8NCL9 501 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 OR6X1Q8NH79 312 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 OR1F12Q8NHA8 337 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 MARC2Q969Z3 335 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 MED30Q96HR3 178 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 SOX7Q9BT81 388 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 DNAJB11Q9UBS4 358 aa9.75□□□□□ -0.85
COL27A1-204ENST00000477421 B8ZZF3 427 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 CDC14BO60729 498 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 OR2F2O95006 317 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 MST1P26927 711 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 CD80P33681 288 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 OR2F1Q13607 317 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 RBM39Q14498 530 aaKnown RBP9.74□□□□□ -0.85
COL27A1-204ENST00000477421 OR2B11Q5JQS5 317 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 H3F3CQ6NXT2 135 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 C1orf210Q8IVY1 113 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 SPIN2AQ99865 258 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 SPIN2BQ9BPZ2 258 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 SULT4A1Q9BR01 284 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 FAM234AQ9H0X4 552 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 TAF9BQ9HBM6 251 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 PRMT8Q9NR22 394 aaPredicted RBP9.74□□□□□ -0.85
COL27A1-204ENST00000477421 CADP27708 2225 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 C9orf170A2RU37 121 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 RFPL4AA6NLU0 287 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 RFPL4AL1F8VTS6 287 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 H3BP45 60 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms