RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.87
VPS50-212ENST00000476413 GOLGA8JA6NMD2 632 aa3.34□□□□□ -1.87
VPS50-212ENST00000476413 K7EN84 100 aa3.34□□□□□ -1.87
VPS50-212ENST00000476413 RRP8O43159 456 aaKnown RBP3.34□□□□□ -1.87
VPS50-212ENST00000476413 SPOPO43791 374 aa3.34□□□□□ -1.87
VPS50-212ENST00000476413 VAPBO95292 243 aa3.34□□□□□ -1.87
VPS50-212ENST00000476413 GOLGA8HP0CJ92 632 aa3.34□□□□□ -1.87
VPS50-212ENST00000476413 IFFO1Q0D2I5 559 aa3.34□□□□□ -1.87
VPS50-212ENST00000476413 DYNC1I2Q13409 638 aaKnown RBP3.34□□□□□ -1.87
VPS50-212ENST00000476413 TAL2Q16559 108 aa3.34□□□□□ -1.87
VPS50-212ENST00000476413 Q6ZSR6 202 aa3.34□□□□□ -1.87
VPS50-212ENST00000476413 PID1Q7Z2X4 250 aa3.34□□□□□ -1.87
VPS50-212ENST00000476413 ERO1BQ86YB8 467 aa3.34□□□□□ -1.87
VPS50-212ENST00000476413 SLC7A5P1Q8MH63 180 aa3.34□□□□□ -1.87
VPS50-212ENST00000476413 TSNAXQ99598 290 aaKnown RBP3.34□□□□□ -1.87
VPS50-212ENST00000476413 RSPO3Q9BXY4 272 aaPredicted RBP3.34□□□□□ -1.87
VPS50-212ENST00000476413 V9GYY9 64 aa3.34□□□□□ -1.87
VPS50-212ENST00000476413 TRAV8-4A0A0B4J246 113 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 ANKRD20A5PA0PJZ0 165 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 A8MUU9 505 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 J3QT63 122 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 NDUFS8O00217 210 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 RCBTB2O95199 551 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 CYB5R3P00387 301 aaPredicted RBP3.33□□□□□ -1.88
VPS50-212ENST00000476413 P01737 135 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 IVLP07476 585 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 HSPD1P10809 573 aaKnown RBP3.33□□□□□ -1.88
VPS50-212ENST00000476413 IL3RAP26951 378 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 TAS2R60P59551 318 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 C2orf54Q08AI8 447 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 LY6EQ16553 131 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 FAM27D1Q5T7N8 215 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 FAM222AQ5U5X8 452 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 AADACL4Q5VUY2 407 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 SYS1Q8N2H4 156 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 LINC00469Q8N7U9 141 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 SLC35G3Q8N808 338 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 CYB561A3Q8NBI2 242 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 OR9A2Q8NGT5 310 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 DEDD2Q8WXF8 326 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 TMEM159Q96B96 161 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 LRRC39Q96DD0 335 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 ALS2CR12Q96Q35 445 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 ZSCAN16Q9H4T2 348 aaPredicted RBP3.33□□□□□ -1.88
VPS50-212ENST00000476413 ANKHQ9HCJ1 492 aa3.33□□□□□ -1.88
VPS50-212ENST00000476413 AK9Q5TCS8 1911 aa3.32□□□□□ -1.88
VPS50-212ENST00000476413 IGLV3-12A0A075B6K2 115 aa3.32□□□□□ -1.88
VPS50-212ENST00000476413 IGHV1-3A0A0C4DH29 117 aa3.32□□□□□ -1.88
VPS50-212ENST00000476413 TVP23AA6NH52 213 aa3.32□□□□□ -1.88
VPS50-212ENST00000476413 RPL36A-HNRNPH2H7BZ11 118 aa3.32□□□□□ -1.88
VPS50-212ENST00000476413 K7EM74 188 aa3.32□□□□□ -1.88
VPS50-212ENST00000476413 PRMT5O14744 637 aaPredicted RBP3.32□□□□□ -1.88
VPS50-212ENST00000476413 GATBO75879 557 aaKnown RBP3.32□□□□□ -1.88
VPS50-212ENST00000476413 S100A9P06702 114 aaKnown RBP3.32□□□□□ -1.88
VPS50-212ENST00000476413 PRKACBP22694 351 aa3.32□□□□□ -1.88
VPS50-212ENST00000476413 P2RY2P41231 377 aa3.32□□□□□ -1.88
VPS50-212ENST00000476413 ETV1P50549 477 aa3.32□□□□□ -1.88
VPS50-212ENST00000476413 MTPNP58546 118 aa3.32□□□□□ -1.88
VPS50-212ENST00000476413 PIGHQ14442 188 aaPredicted RBP3.32□□□□□ -1.88
VPS50-212ENST00000476413 HMGN2P46Q86SG4 172 aa3.32□□□□□ -1.88
VPS50-212ENST00000476413 OR1S1Q8NH92 325 aa3.32□□□□□ -1.88
VPS50-212ENST00000476413 NDNFQ8TB73 568 aa3.32□□□□□ -1.88
VPS50-212ENST00000476413 STMN4Q9H169 189 aaPredicted RBP3.32□□□□□ -1.88
VPS50-212ENST00000476413 CA10Q9NS85 328 aa3.32□□□□□ -1.88
VPS50-212ENST00000476413 DDIT4Q9NX09 232 aa3.32□□□□□ -1.88
VPS50-212ENST00000476413 TFR2Q9UP52 801 aa3.32□□□□□ -1.88
VPS50-212ENST00000476413 TRAV8-7A0A075B6U6 113 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 TRAV8-6A0A0B4J262 113 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 TRAV40A0A0B4J280 105 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 H7C2Y5 167 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 MYL12BO14950 172 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 IGKV1D-16P01601 117 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 OR5AL1P0C617 328 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 DMC1Q14565 340 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 MAD2L1BPQ15013 274 aaPredicted RBP3.31□□□□□ -1.88
VPS50-212ENST00000476413 SHHQ15465 462 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 KRTAP13-3Q3SY46 172 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 SETD3Q86TU7 594 aaPredicted RBP3.31□□□□□ -1.88
VPS50-212ENST00000476413 SLC25A29Q8N8R3 303 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 TMEM105Q8N8V8 129 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 ZFAND1Q8TCF1 268 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 RTN4IP1Q8WWV3 396 aaPredicted RBP3.31□□□□□ -1.88
VPS50-212ENST00000476413 LINC00477Q96M19 166 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 Q96MT0 163 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 UTP23Q9BRU9 249 aaKnown RBP3.31□□□□□ -1.88
VPS50-212ENST00000476413 SIKE1Q9BRV8 207 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 XKR8Q9H6D3 395 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 RBMX2Q9Y388 322 aaKnown RBP3.31□□□□□ -1.88
VPS50-212ENST00000476413 WIF1Q9Y5W5 379 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 LOXHD1Q8IVV2 1947 aa3.31□□□□□ -1.88
VPS50-212ENST00000476413 BTNL10A8MVZ5 291 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 SEC14L6B5MCN3 397 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 M0R1B8 84 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 GATCO43716 136 aaKnown RBP3.3□□□□□ -1.88
VPS50-212ENST00000476413 SC5DO75845 299 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 IL4P05112 153 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 RHOCP08134 193 aa3.3□□□□□ -1.88
VPS50-212ENST00000476413 MMP7P09237 267 aaPredicted RBP3.3□□□□□ -1.88
VPS50-212ENST00000476413 LIPCP11150 499 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms