RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 TMEM236Q5W0B7 351 aa1.73□□□□□ -2.13
LTN1-204ENST00000475344 HCP5Q6MZN7 132 aa1.73□□□□□ -2.13
LTN1-204ENST00000475344 ULK3Q6PHR2 472 aa1.73□□□□□ -2.13
LTN1-204ENST00000475344 DAW1Q8N136 415 aa1.73□□□□□ -2.13
LTN1-204ENST00000475344 ORMDL3Q8N138 153 aa1.73□□□□□ -2.13
LTN1-204ENST00000475344 SLC25A29Q8N8R3 303 aa1.73□□□□□ -2.13
LTN1-204ENST00000475344 OR4M2Q8NGB6 313 aa1.73□□□□□ -2.13
LTN1-204ENST00000475344 PHOSPHO2Q8TCD6 241 aa1.73□□□□□ -2.13
LTN1-204ENST00000475344 CA5BP1Q8WTZ4 195 aa1.73□□□□□ -2.13
LTN1-204ENST00000475344 ISG20Q96AZ6 181 aaKnown RBP1.73□□□□□ -2.13
LTN1-204ENST00000475344 RHOXF2Q9BQY4 288 aa1.73□□□□□ -2.13
LTN1-204ENST00000475344 IL22Q9GZX6 179 aa1.73□□□□□ -2.13
LTN1-204ENST00000475344 HEBP1Q9NRV9 189 aa1.73□□□□□ -2.13
LTN1-204ENST00000475344 CES1P1Q9UKY3 287 aa1.73□□□□□ -2.13
LTN1-204ENST00000475344 PSME2Q9UL46 239 aa1.73□□□□□ -2.13
LTN1-204ENST00000475344 FARSAQ9Y285 508 aaKnown RBP1.73□□□□□ -2.13
LTN1-204ENST00000475344 SIGLEC1Q9BZZ2 1709 aa1.73□□□□□ -2.13
LTN1-204ENST00000475344 FBN3Q75N90 2809 aa1.73□□□□□ -2.13
LTN1-204ENST00000475344 THADAQ6YHU6 1953 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 CACNA1DQ01668 2161 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 MROH7Q68CQ1 1323 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 BRCA1P38398 1863 aaKnown RBP1.72□□□□□ -2.13
LTN1-204ENST00000475344 CCL15-CCL14A0A0B4J2E2 113 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 OR6C70A6NIJ9 312 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 HACD1B0YJ81 288 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 ZNF701M0R085 212 aaPredicted RBP1.72□□□□□ -2.13
LTN1-204ENST00000475344 TRDMT1O14717 391 aaKnown RBP1.72□□□□□ -2.13
LTN1-204ENST00000475344 SMC2O95347 1197 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 TTC4O95801 387 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 MMP7P09237 267 aaPredicted RBP1.72□□□□□ -2.13
LTN1-204ENST00000475344 MSR1P21757 451 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 ARL2P36404 184 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 GALR1P47211 349 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 DAOAP59103 153 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 PPP1CAP62136 330 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 INCA1Q0VD86 236 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 GABRA6Q16445 453 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 CCL15Q16663 113 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 LUZP6Q538Z0 58 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 KLHL12Q53G59 568 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 FAM104BQ5XKR9 115 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 MORN3Q6PF18 240 aaPredicted RBP1.72□□□□□ -2.13
LTN1-204ENST00000475344 MRPL21Q7Z2W9 205 aaKnown RBP1.72□□□□□ -2.13
LTN1-204ENST00000475344 SLC30A8Q8IWU4 369 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 KIF2BQ8N4N8 673 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 PROKR2Q8NFJ6 384 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 PEX13Q92968 403 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 ISOC2Q96AB3 205 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 ZFP3Q96NJ6 502 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 GPR82Q96P67 336 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 PDCD1LG2Q9BQ51 273 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 BLZF1Q9H2G9 400 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 C8orf33Q9H7E9 229 aaPredicted RBP1.72□□□□□ -2.13
LTN1-204ENST00000475344 DYRK4Q9NR20 520 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 CHRAC1Q9NRG0 131 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 RBFOX1Q9NWB1 397 aaKnown RBP1.72□□□□□ -2.13
LTN1-204ENST00000475344 ADA2Q9NZK5 511 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 HMGXB4Q9UGU5 601 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 DDX19BQ9UMR2 479 aa1.72□□□□□ -2.13
LTN1-204ENST00000475344 NPHP4O75161 1426 aaPredicted RBP1.72□□□□□ -2.13
LTN1-204ENST00000475344 A0A1W2PRF3 423 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 A0A1W2PRM7 423 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 NCF1BA6NI72 391 aaPredicted RBP1.71□□□□□ -2.14
LTN1-204ENST00000475344 CENPXA8MT69 81 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 CEACAM18A8MTB9 384 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 NCF1CA8MVU1 366 aaPredicted RBP1.71□□□□□ -2.14
LTN1-204ENST00000475344 ZNF99A8MXY4 864 aaPredicted RBP1.71□□□□□ -2.14
LTN1-204ENST00000475344 MFNGO00587 321 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 SIVA1O15304 175 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 CCDC22O60826 627 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 IGLV7-43P04211 117 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 SLC35G6P0C7Q6 338 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 MEF2CQ06413 473 aaPredicted RBP1.71□□□□□ -2.14
LTN1-204ENST00000475344 C2orf54Q08AI8 447 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 MAPRE2Q15555 327 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 KRTAP13-4Q3LI77 160 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 TMEM136Q6ZRR5 245 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 STK40Q8N2I9 435 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 LINC00469Q8N7U9 141 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 AGR3Q8TD06 166 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 S100PBPQ96BU1 408 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 ALS2CR12Q96Q35 445 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 TM2D3Q9BRN9 247 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 TMEM175Q9BSA9 504 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 MARVELD1Q9BSK0 173 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 TAS2R5Q9NYW4 299 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 SBNO1A3KN83 1393 aa1.71□□□□□ -2.14
LTN1-204ENST00000475344 LOXHD1Q8IVV2 1947 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 AKR7A2O43488 359 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 SLC19A2O60779 497 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 DEDDO75618 318 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 KLK1P06870 262 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 CD99P14209 185 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 IL3RAP26951 378 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 CCT6AP40227 531 aaKnown RBP1.7□□□□□ -2.14
LTN1-204ENST00000475344 CMC4P56277 68 aaPredicted RBP1.7□□□□□ -2.14
LTN1-204ENST00000475344 ELF3P78545 371 aaPredicted RBP1.7□□□□□ -2.14
LTN1-204ENST00000475344 ZNF235Q14590 738 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 SP6Q3SY56 376 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 MRPL2Q5T653 305 aaKnown RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms