RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 NDUFAF7Q7L592 441 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 BBS7Q8IWZ6 715 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 OR5AR1Q8NGP9 310 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 ZCCHC13Q8WW36 166 aaKnown RBP1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 NAPGQ99747 312 aaPredicted RBP1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 AGMATQ9BSE5 352 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 DHX35Q9H5Z1 703 aaKnown RBP1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 TRIM45Q9H8W5 580 aaPredicted RBP1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 C6orf50Q9HD87 102 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 OR2S2Q9NQN1 319 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 ENPP4Q9Y6X5 453 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 INSRP06213 1382 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 MROH7Q68CQ1 1323 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 TMEM72A0PK05 275 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 TRIM64CA6NLI5 447 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 HACD1B0YJ81 288 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 C9JQL5 133 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 J3QRE1 110 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 SYNGR2O43760 224 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 FARS2O95363 451 aaKnown RBP1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 FSTL3O95633 263 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 TPM2P07951 284 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 SNRPAP09012 282 aaKnown RBP1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 ACOT2P49753 483 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 RGS6P49758 472 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 GZMMP51124 257 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 CMC4P56277 68 aaPredicted RBP1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 CLDN6P56747 220 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 RPS15AP62244 130 aaKnown RBP1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 RAB11AP62491 216 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 ELF3P78545 371 aaPredicted RBP1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 RPEL1Q2QD12 228 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 KLHL40Q2TBA0 621 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 TPRG1LQ5T0D9 272 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 TMEM236Q5W0B7 351 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 TMPPEQ6ZT21 453 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 TCF24Q7RTU0 167 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 ADM2Q7Z4H4 148 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 PDPNQ86YL7 162 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 CPNE9Q8IYJ1 553 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 SLC7A5P1Q8MH63 180 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 ZNF420Q8TAQ5 688 aaPredicted RBP1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 S100PBPQ96BU1 408 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 FAM19A4Q96LR4 140 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 C18orf15Q96N68 181 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 CSPG4P5Q96PW8 444 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 PKMYT1Q99640 499 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 TMEM175Q9BSA9 504 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 PLA2G12AQ9BZM1 189 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 REEP1Q9H902 201 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 TBC1D24Q9ULP9 559 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 TRAPPC1Q9Y5R8 145 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 BAZ2AQ9UIF9 1905 aaKnown RBP1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 NLRC5Q86WI3 1866 aa1.48□□□□□ -2.17
ECHDC1-213ENST00000474240 IGHV6-1A0A0B4J1U7 121 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 TRAV25A0A0B4J276 109 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 A0A1W2PNN7 141 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 LINC01619G3V211 115 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 GOLGA8TH3BQL2 631 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 CLDN34H7C241 214 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 CCDC22O60826 627 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 DNAJB6O75190 326 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 HMMRO75330 724 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 HLA-GP17693 338 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 BMI1P35226 326 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 OR12D2P58182 307 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 INCA1Q0VD86 236 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 C5orf64Q2M2E5 130 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 TTMPQ5BVD1 217 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 MLIPQ5VWP3 458 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 TTC19Q6DKK2 380 aaPredicted RBP1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 SMARCD3Q6STE5 483 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 OTUD6AQ7L8S5 288 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 LRRC8AQ8IWT6 810 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 OR6K6Q8NGW6 343 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 ORAOV1Q8WV07 137 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 HGDQ93099 445 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 ARMC7Q9H6L4 198 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 LYRM4Q9HD34 91 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 LZTFL1Q9NQ48 299 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 ZNF302Q9NR11 478 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 RBFOX1Q9NWB1 397 aaKnown RBP1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 IFNKQ9P0W0 207 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 CES1P1Q9UKY3 287 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 OR51B2Q9Y5P1 312 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 COMMD3-BMI1R4GMX3 469 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 SSH2Q76I76 1423 aa1.47□□□□□ -2.17
ECHDC1-213ENST00000474240 LOC102724200A0A096LPH7 203 aaPredicted RBP1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 TRAV8-4A0A0B4J246 113 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 CCL15-CCL14A0A0B4J2E2 113 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 CENPXA8MT69 81 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 TEX46H3BTG2 121 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 KCNK2O95069 426 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 P01737 135 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 OR4Q2P0C623 313 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 OR8G3PP0DMU2 310 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 ZNF35P13682 527 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 GABRG2P18507 467 aa1.46□□□□□ -2.18
ECHDC1-213ENST00000474240 IL3RAP26951 378 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms