RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 PI4KAP42356 2102 aa18.55■□□□□ 0.56
COL18A1-207ENST00000473212 MEX3AA1L020 520 aaKnown RBP18.55■□□□□ 0.56
COL18A1-207ENST00000473212 RNASEK-C17orf49H0YIS7 233 aa18.55■□□□□ 0.56
COL18A1-207ENST00000473212 SFTA3P0C7M3 94 aa18.55■□□□□ 0.56
COL18A1-207ENST00000473212 KCNJ3P48549 501 aa18.55■□□□□ 0.56
COL18A1-207ENST00000473212 TMEM176BQ3YBM2 270 aaPredicted RBP18.55■□□□□ 0.56
COL18A1-207ENST00000473212 OR2A2Q6IF42 318 aa18.55■□□□□ 0.56
COL18A1-207ENST00000473212 SLC25A47Q6Q0C1 308 aa18.55■□□□□ 0.56
COL18A1-207ENST00000473212 DOK3Q7L591 496 aa18.55■□□□□ 0.56
COL18A1-207ENST00000473212 FSCN3Q9NQT6 498 aa18.55■□□□□ 0.56
COL18A1-207ENST00000473212 SDHAF3Q9NRP4 125 aa18.55■□□□□ 0.56
COL18A1-207ENST00000473212 SEMA5BQ9P283 1151 aa18.55■□□□□ 0.56
COL18A1-207ENST00000473212 BLVRBP30043 206 aaPredicted RBP18.54■□□□□ 0.56
COL18A1-207ENST00000473212 AVPI1Q5T686 147 aa18.54■□□□□ 0.56
COL18A1-207ENST00000473212 SSC4DQ8WTU2 575 aa18.54■□□□□ 0.56
COL18A1-207ENST00000473212 NECAB3Q96P71 396 aaPredicted RBP18.54■□□□□ 0.56
COL18A1-207ENST00000473212 COA4Q9NYJ1 87 aa18.54■□□□□ 0.56
COL18A1-207ENST00000473212 FBXO24O75426 580 aa18.54■□□□□ 0.56
COL18A1-207ENST00000473212 HPNP05981 417 aa18.54■□□□□ 0.56
COL18A1-207ENST00000473212 HKR1P10072 659 aa18.54■□□□□ 0.56
COL18A1-207ENST00000473212 ID4P47928 161 aa18.54■□□□□ 0.56
COL18A1-207ENST00000473212 TAS2R46P59540 309 aa18.54■□□□□ 0.56
COL18A1-207ENST00000473212 KISS1Q15726 138 aa18.54■□□□□ 0.56
COL18A1-207ENST00000473212 FAM89BQ8N5H3 189 aa18.54■□□□□ 0.56
COL18A1-207ENST00000473212 OR14K1Q8NGZ2 314 aa18.54■□□□□ 0.56
COL18A1-207ENST00000473212 TGIF2Q9GZN2 237 aa18.54■□□□□ 0.56
COL18A1-207ENST00000473212 FBXO9Q9UK97 447 aaPredicted RBP18.54■□□□□ 0.56
COL18A1-207ENST00000473212 IGHV3-15A0A0B4J1V0 119 aa18.53■□□□□ 0.56
COL18A1-207ENST00000473212 MTRF1O75570 445 aaKnown RBP18.53■□□□□ 0.56
COL18A1-207ENST00000473212 SERPINA2P20848 420 aa18.53■□□□□ 0.56
COL18A1-207ENST00000473212 CCL1P22362 96 aa18.53■□□□□ 0.56
COL18A1-207ENST00000473212 PNLDC1Q8NA58 520 aaKnown RBP18.53■□□□□ 0.56
COL18A1-207ENST00000473212 CADM4Q8NFZ8 388 aa18.53■□□□□ 0.56
COL18A1-207ENST00000473212 LYZL4Q96KX0 146 aa18.53■□□□□ 0.56
COL18A1-207ENST00000473212 MRGPRX4Q96LA9 322 aa18.53■□□□□ 0.56
COL18A1-207ENST00000473212 PECRQ9BY49 303 aa18.53■□□□□ 0.56
COL18A1-207ENST00000473212 MYOTQ9UBF9 498 aa18.53■□□□□ 0.56
COL18A1-207ENST00000473212 PTGER4P35408 488 aa18.53■□□□□ 0.56
COL18A1-207ENST00000473212 PTGFRP43088 359 aa18.53■□□□□ 0.56
COL18A1-207ENST00000473212 FAM189A2Q15884 450 aa18.53■□□□□ 0.56
COL18A1-207ENST00000473212 CHRFAM7AQ494W8 412 aa18.53■□□□□ 0.56
COL18A1-207ENST00000473212 PHYHD1Q5SRE7 291 aa18.53■□□□□ 0.56
COL18A1-207ENST00000473212 RHBDD1Q8TEB9 315 aa18.53■□□□□ 0.56
COL18A1-207ENST00000473212 EMG1Q92979 244 aaKnown RBP18.53■□□□□ 0.56
COL18A1-207ENST00000473212 PLA2G2EQ9NZK7 142 aa18.53■□□□□ 0.56
COL18A1-207ENST00000473212 C9JQL5 133 aa18.52■□□□□ 0.56
COL18A1-207ENST00000473212 STMND1H3BQB6 276 aa18.52■□□□□ 0.56
COL18A1-207ENST00000473212 SCRG1O75711 98 aa18.52■□□□□ 0.56
COL18A1-207ENST00000473212 ZNF708P17019 499 aa18.52■□□□□ 0.56
COL18A1-207ENST00000473212 ACY1Q03154 408 aa18.52■□□□□ 0.56
COL18A1-207ENST00000473212 RBM39Q14498 530 aaKnown RBP18.52■□□□□ 0.56
COL18A1-207ENST00000473212 SHBQ15464 509 aa18.52■□□□□ 0.56
COL18A1-207ENST00000473212 EIF5AL1Q6IS14 154 aaKnown RBP18.52■□□□□ 0.56
COL18A1-207ENST00000473212 GUSBP11Q6P575 273 aa18.52■□□□□ 0.56
COL18A1-207ENST00000473212 ZNF701Q9NV72 531 aaPredicted RBP18.52■□□□□ 0.56
COL18A1-207ENST00000473212 PCDHGA1Q9Y5H4 931 aa18.52■□□□□ 0.56
COL18A1-207ENST00000473212 COL6A3P12111 3177 aa18.52■□□□□ 0.56
COL18A1-207ENST00000473212 IGLV3-12A0A075B6K2 115 aa18.52■□□□□ 0.55
COL18A1-207ENST00000473212 IGKV1D-8A0A087WSZ0 117 aa18.52■□□□□ 0.55
COL18A1-207ENST00000473212 FIGNL2A6NMB9 653 aa18.52■□□□□ 0.55
COL18A1-207ENST00000473212 ETV2O00321 342 aaPredicted RBP18.52■□□□□ 0.55
COL18A1-207ENST00000473212 HEXAP06865 529 aa18.52■□□□□ 0.55
COL18A1-207ENST00000473212 CD80P33681 288 aa18.52■□□□□ 0.55
COL18A1-207ENST00000473212 EIF5AP63241 154 aaKnown RBP18.52■□□□□ 0.55
COL18A1-207ENST00000473212 SPEM2Q0P670 501 aa18.52■□□□□ 0.55
COL18A1-207ENST00000473212 IAH1Q2TAA2 248 aaPredicted RBP18.52■□□□□ 0.55
COL18A1-207ENST00000473212 AKIRIN2Q53H80 203 aa18.52■□□□□ 0.55
COL18A1-207ENST00000473212 WDSUB1Q8N9V3 476 aa18.52■□□□□ 0.55
COL18A1-207ENST00000473212 OR2M3Q8NG83 312 aa18.52■□□□□ 0.55
COL18A1-207ENST00000473212 PGAM5Q96HS1 289 aa18.52■□□□□ 0.55
COL18A1-207ENST00000473212 C14orf166Q9Y224 244 aaKnown RBP18.52■□□□□ 0.55
COL18A1-207ENST00000473212 MEMO1Q9Y316 297 aa18.52■□□□□ 0.55
COL18A1-207ENST00000473212 FOXI3A8MTJ6 420 aaPredicted RBP18.51■□□□□ 0.55
COL18A1-207ENST00000473212 F5H5K5 113 aa18.51■□□□□ 0.55
COL18A1-207ENST00000473212 G3V3Y1 287 aa18.51■□□□□ 0.55
COL18A1-207ENST00000473212 TAAR5O14804 337 aa18.51■□□□□ 0.55
COL18A1-207ENST00000473212 BCAT2O15382 392 aaPredicted RBP18.51■□□□□ 0.55
COL18A1-207ENST00000473212 WDR74Q6RFH5 385 aaPredicted RBP18.51■□□□□ 0.55
COL18A1-207ENST00000473212 CNTNAP3Q9BZ76 1288 aa18.51■□□□□ 0.55
COL18A1-207ENST00000473212 OR5H15A6NDH6 313 aa18.51■□□□□ 0.55
COL18A1-207ENST00000473212 MASP2O00187 686 aa18.51■□□□□ 0.55
COL18A1-207ENST00000473212 ZNF205O95201 554 aa18.51■□□□□ 0.55
COL18A1-207ENST00000473212 IFNA2P01563 188 aa18.51■□□□□ 0.55
COL18A1-207ENST00000473212 FCGR3AP08637 254 aa18.51■□□□□ 0.55
COL18A1-207ENST00000473212 ZNF43P17038 809 aa18.51■□□□□ 0.55
COL18A1-207ENST00000473212 RPL12P30050 165 aaKnown RBP18.51■□□□□ 0.55
COL18A1-207ENST00000473212 SULT1A2P50226 295 aa18.51■□□□□ 0.55
COL18A1-207ENST00000473212 CLDN17P56750 224 aa18.51■□□□□ 0.55
COL18A1-207ENST00000473212 PEA15Q15121 130 aa18.51■□□□□ 0.55
COL18A1-207ENST00000473212 BTNL8Q6UX41 500 aa18.51■□□□□ 0.55
COL18A1-207ENST00000473212 LRRC18Q8N456 261 aa18.51■□□□□ 0.55
COL18A1-207ENST00000473212 OR6X1Q8NH79 312 aa18.51■□□□□ 0.55
COL18A1-207ENST00000473212 RNF138Q8WVD3 245 aa18.51■□□□□ 0.55
COL18A1-207ENST00000473212 ELL3Q9HB65 397 aaPredicted RBP18.51■□□□□ 0.55
COL18A1-207ENST00000473212 ZNF581Q9P0T4 197 aa18.51■□□□□ 0.55
COL18A1-207ENST00000473212 A0A1W2PQM1 296 aa18.5■□□□□ 0.55
COL18A1-207ENST00000473212 DBHP09172 617 aa18.5■□□□□ 0.55
COL18A1-207ENST00000473212 FAHP16930 419 aa18.5■□□□□ 0.55
COL18A1-207ENST00000473212 RBMXP38159 391 aaKnown RBP18.5■□□□□ 0.55
COL18A1-207ENST00000473212 ETV3LQ6ZN32 361 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms