RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 LYPD6BQ8NI32 183 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 GPR148Q8TDV2 347 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 Q8WTZ3 238 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 NEU4Q8WWR8 484 aaPredicted RBP4.5□□□□□ -1.69
COL3A1-205ENST00000470167 SMIM19Q96E16 107 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 MYEOVQ96EZ4 313 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 GNRHR2Q96P88 292 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 OR2A7Q96R45 310 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 OR6C1Q96RD1 312 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 GINS3Q9BRX5 216 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 TAPBPLQ9BX59 468 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 TMEM126AQ9H061 195 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 RAB6CQ9H0N0 254 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 IL25Q9H293 177 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 OR52D1Q9H346 318 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 PRDM12Q9H4Q4 367 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 A4GALTQ9NPC4 353 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 TMEM100Q9NV29 134 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 TMEM45AQ9NWC5 275 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 B4GALT7Q9UBV7 327 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 CACFD1Q9UGQ2 172 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF107Q9UII5 783 aaPredicted RBP4.5□□□□□ -1.69
COL3A1-205ENST00000470167 CD207Q9UJ71 328 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 BOKQ9UMX3 212 aaPredicted RBP4.5□□□□□ -1.69
COL3A1-205ENST00000470167 HS3ST2Q9Y278 367 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 MRPS28Q9Y2Q9 187 aaKnown RBP4.5□□□□□ -1.69
COL3A1-205ENST00000470167 CMAHPQ9Y471 501 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 WIPI2Q9Y4P8 454 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 ENPP4Q9Y6X5 453 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 WDR81Q562E7 1941 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 ANKRD36CQ5JPF3 1778 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 A0A0C4DFX4 3053 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 CUL7Q14999 1698 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 TRAV19A0A0A6YYK7 116 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 IGHV1-69-2A0A0G2JMI3 117 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 A0A1B0GU03 582 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 SCO2A0A1W2PP80 73 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 A0A1W2PPM1 405 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 A0A1W2PR77 199 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 A0A1W2PRS3 328 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 UBE2QL1A1L167 161 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 PRSS38A1L453 326 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 TMEM89A2RUT3 159 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 OR2M5A3KFT3 312 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 TMEM189A5PLL7 270 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 SLC22A20A6NK97 555 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 IDSB3KWA1 339 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 TEX22C9J3V5 150 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 MPPED1O15442 326 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 OR1F1O43749 312 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 TMPRSS11DO60235 418 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 SEMG1P04279 462 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 HIST1H2ABP04908 130 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 CTSDP07339 412 aaPredicted RBP4.49□□□□□ -1.69
COL3A1-205ENST00000470167 RHOCP08134 193 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 OR4A8P0C604 315 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 SMIM10L2AP0DMW4 78 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 SMIM10L2BP0DMW5 78 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 CXCL3P19876 107 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 IDSP22304 550 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 RPS12P25398 132 aaKnown RBP4.49□□□□□ -1.69
COL3A1-205ENST00000470167 ATP6V0CP27449 155 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 PSMB9P28065 219 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 ELK3P41970 407 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 OR3A2P47893 321 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 AMTP48728 403 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 GNG4P50150 75 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF140P52738 457 aaPredicted RBP4.49□□□□□ -1.69
COL3A1-205ENST00000470167 CLRN1P58418 232 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 SLC35A1P78382 337 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 HSD52Q0P140 79 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 PJVKQ0ZLH3 352 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 MFAP5Q13361 173 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 OR2F1Q13607 317 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 RUNX3Q13761 415 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 PDGFRLQ15198 375 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 CDKN3Q16667 212 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 CR1LQ2VPA4 569 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 TMEM97Q5BJF2 176 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF776Q68DI1 518 aaPredicted RBP4.49□□□□□ -1.69
COL3A1-205ENST00000470167 FCRL6Q6DN72 434 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF549Q6P9A3 640 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 AGTRAPQ6RW13 159 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 TBPL2Q6SJ96 375 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 TEX43Q6ZNM6 134 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 SLC25A26Q70HW3 274 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 HIST3H2AQ7L7L0 130 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 CLEC14AQ86T13 490 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 CALHM3Q86XJ0 350 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 TMEM123Q8N131 208 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 BEST3Q8N1M1 668 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 PRELID2Q8N945 189 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 C5orf17Q8NAS9 161 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 INO80EQ8NBZ0 244 aaPredicted RBP4.49□□□□□ -1.69
COL3A1-205ENST00000470167 TSTD1Q8NFU3 115 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 OR10S1Q8NGN2 331 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 SAP25Q8TEE9 199 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 WIPF2Q8TF74 440 aaPredicted RBP4.49□□□□□ -1.69
COL3A1-205ENST00000470167 EEF1AKMT1Q8WVE0 214 aa4.49□□□□□ -1.69
COL3A1-205ENST00000470167 HIST1H2ACQ93077 130 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms