RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 CFL1P23528 166 aaKnown RBP15.26■□□□□ 0.03
NCKIPSD-209ENST00000470006 SLC15A1P46059 708 aa15.26■□□□□ 0.03
NCKIPSD-209ENST00000470006 ERVFRD-1P60508 538 aa15.26■□□□□ 0.03
NCKIPSD-209ENST00000470006 RPL31P62899 125 aaKnown RBP15.26■□□□□ 0.03
NCKIPSD-209ENST00000470006 SNCBQ16143 134 aa15.26■□□□□ 0.03
NCKIPSD-209ENST00000470006 METTL21CQ5VZV1 264 aa15.26■□□□□ 0.03
NCKIPSD-209ENST00000470006 LYPD4Q6UWN0 246 aa15.26■□□□□ 0.03
NCKIPSD-209ENST00000470006 FAM57BQ71RH2 274 aa15.26■□□□□ 0.03
NCKIPSD-209ENST00000470006 OR5K1Q8NHB7 308 aa15.26■□□□□ 0.03
NCKIPSD-209ENST00000470006 FAM162AQ96A26 154 aa15.26■□□□□ 0.03
NCKIPSD-209ENST00000470006 YY1AP1Q9H869 796 aa15.26■□□□□ 0.03
NCKIPSD-209ENST00000470006 BRD7Q9NPI1 651 aa15.26■□□□□ 0.03
NCKIPSD-209ENST00000470006 IGKV1D-17A0A075B6S4 117 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 hCG_38984A0A1B0GV85 526 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 ZNF878C9JN71 531 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 H3BUI4 141 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 RHBDL1O75783 438 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 CCDC159P0C7I6 412 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 PSG2P11465 335 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 LMO1P25800 156 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 PRDX4Q13162 271 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 KRT72Q14CN4 511 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 MAPRE2Q15555 327 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 TIGD4Q8IY51 512 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 OR4M1Q8NGD0 313 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 OR2T4Q8NH00 348 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 PIGCQ92535 297 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 MYDGFQ969H8 173 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 FOXRED1Q96CU9 486 aaPredicted RBP15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 HIST1H2AAQ96QV6 131 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 USE1Q9NZ43 259 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 DNAJC27Q9NZQ0 273 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 MPC1Q9Y5U8 109 aa15.25■□□□□ 0.03
NCKIPSD-209ENST00000470006 ZNF593O00488 134 aaPredicted RBP15.24■□□□□ 0.03
NCKIPSD-209ENST00000470006 IDH3BO43837 385 aa15.24■□□□□ 0.03
NCKIPSD-209ENST00000470006 DIRAS1O95057 198 aa15.24■□□□□ 0.03
NCKIPSD-209ENST00000470006 PSKH1P11801 424 aa15.24■□□□□ 0.03
NCKIPSD-209ENST00000470006 CCL3L1P16619 93 aa15.24■□□□□ 0.03
NCKIPSD-209ENST00000470006 RHCEP18577 417 aa15.24■□□□□ 0.03
NCKIPSD-209ENST00000470006 SLC25A1P53007 311 aa15.24■□□□□ 0.03
NCKIPSD-209ENST00000470006 GRB2P62993 217 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-209ENST00000470006 LIPEQ05469 1076 aa15.24■□□□□ 0.03
NCKIPSD-209ENST00000470006 TMEM200BQ69YZ2 307 aa15.24■□□□□ 0.03
NCKIPSD-209ENST00000470006 OR4X2Q8NGF9 303 aa15.24■□□□□ 0.03
NCKIPSD-209ENST00000470006 MALSU1Q96EH3 234 aa15.24■□□□□ 0.03
NCKIPSD-209ENST00000470006 OR10A2Q9H208 303 aa15.24■□□□□ 0.03
NCKIPSD-209ENST00000470006 CMTM6Q9NX76 183 aa15.24■□□□□ 0.03
NCKIPSD-209ENST00000470006 AP3M1Q9Y2T2 418 aa15.24■□□□□ 0.03
NCKIPSD-209ENST00000470006 COMMD3-BMI1R4GMX3 469 aa15.24■□□□□ 0.03
NCKIPSD-209ENST00000470006 FAM90A8PA6NJQ4 464 aa15.23■□□□□ 0.03
NCKIPSD-209ENST00000470006 FMO3P31513 532 aa15.23■□□□□ 0.03
NCKIPSD-209ENST00000470006 ENTPD1P49961 510 aa15.23■□□□□ 0.03
NCKIPSD-209ENST00000470006 KLF10Q13118 480 aa15.23■□□□□ 0.03
NCKIPSD-209ENST00000470006 DYNC1I2Q13409 638 aaKnown RBP15.23■□□□□ 0.03
NCKIPSD-209ENST00000470006 TCTEX1D4Q5JR98 221 aa15.23■□□□□ 0.03
NCKIPSD-209ENST00000470006 UNQ9370/PRO34162Q6UXP9 181 aa15.23■□□□□ 0.03
NCKIPSD-209ENST00000470006 OR2T27Q8NH04 317 aa15.23■□□□□ 0.03
NCKIPSD-209ENST00000470006 ZNRF4Q8WWF5 429 aa15.23■□□□□ 0.03
NCKIPSD-209ENST00000470006 OR5P3Q8WZ94 311 aa15.23■□□□□ 0.03
NCKIPSD-209ENST00000470006 PGAM5Q96HS1 289 aa15.23■□□□□ 0.03
NCKIPSD-209ENST00000470006 C1orf21Q9H246 121 aa15.23■□□□□ 0.03
NCKIPSD-209ENST00000470006 ABCB9Q9NP78 766 aa15.23■□□□□ 0.03
NCKIPSD-209ENST00000470006 NDUFAF4Q9P032 175 aa15.23■□□□□ 0.03
NCKIPSD-209ENST00000470006 TBL2Q9Y4P3 447 aaKnown RBP15.23■□□□□ 0.03
NCKIPSD-209ENST00000470006 LRP12Q9Y561 859 aa15.23■□□□□ 0.03
NCKIPSD-209ENST00000470006 TENM2Q9NT68 2774 aa15.22■□□□□ 0.03
NCKIPSD-209ENST00000470006 APOC1P02654 83 aa15.22■□□□□ 0.03
NCKIPSD-209ENST00000470006 GPM6AP51674 278 aa15.22■□□□□ 0.03
NCKIPSD-209ENST00000470006 OR12D2P58182 307 aa15.22■□□□□ 0.03
NCKIPSD-209ENST00000470006 SLC34A1Q06495 639 aa15.22■□□□□ 0.03
NCKIPSD-209ENST00000470006 DOC2BQ14184 412 aa15.22■□□□□ 0.03
NCKIPSD-209ENST00000470006 KLHL12Q53G59 568 aa15.22■□□□□ 0.03
NCKIPSD-209ENST00000470006 DMRTC1Q5HYR2 192 aa15.22■□□□□ 0.03
NCKIPSD-209ENST00000470006 THAP5Q7Z6K1 395 aa15.22■□□□□ 0.03
NCKIPSD-209ENST00000470006 PIGWQ7Z7B1 504 aa15.22■□□□□ 0.03
NCKIPSD-209ENST00000470006 OR52H1Q8NGJ2 320 aa15.22■□□□□ 0.03
NCKIPSD-209ENST00000470006 ZNF649Q9BS31 505 aa15.22■□□□□ 0.03
NCKIPSD-209ENST00000470006 INTS9Q9NV88 658 aaKnown RBP15.22■□□□□ 0.03
NCKIPSD-209ENST00000470006 DHRS12A0PJE2 317 aa15.21■□□□□ 0.03
NCKIPSD-209ENST00000470006 SLC1A7O00341 560 aa15.21■□□□□ 0.03
NCKIPSD-209ENST00000470006 ZNF121P58317 390 aaPredicted RBP15.21■□□□□ 0.03
NCKIPSD-209ENST00000470006 EIF2B1Q14232 305 aaKnown RBP15.21■□□□□ 0.03
NCKIPSD-209ENST00000470006 ZDHHC23Q8IYP9 409 aa15.21■□□□□ 0.03
NCKIPSD-209ENST00000470006 LINC00471Q8N535 108 aa15.21■□□□□ 0.03
NCKIPSD-209ENST00000470006 C11orf42Q8N5U0 333 aa15.21■□□□□ 0.03
NCKIPSD-209ENST00000470006 FAM86B1Q8N7N1 296 aa15.21■□□□□ 0.03
NCKIPSD-209ENST00000470006 LINC00482Q8N8I6 264 aa15.21■□□□□ 0.03
NCKIPSD-209ENST00000470006 ZNF511Q8NB15 262 aa15.21■□□□□ 0.03
NCKIPSD-209ENST00000470006 OR13D1Q8NGV5 346 aa15.21■□□□□ 0.03
NCKIPSD-209ENST00000470006 ZNF671Q8TAW3 534 aa15.21■□□□□ 0.03
NCKIPSD-209ENST00000470006 CAPSLQ8WWF8 208 aa15.21■□□□□ 0.03
NCKIPSD-209ENST00000470006 SDSLQ96GA7 329 aa15.21■□□□□ 0.03
NCKIPSD-209ENST00000470006 SIKE1Q9BRV8 207 aa15.21■□□□□ 0.03
NCKIPSD-209ENST00000470006 ZMAT5Q9UDW3 170 aaKnown RBP15.21■□□□□ 0.03
NCKIPSD-209ENST00000470006 ZNF222Q9UK12 451 aa15.21■□□□□ 0.03
NCKIPSD-209ENST00000470006 HILPDAQ9Y5L2 63 aa15.21■□□□□ 0.03
NCKIPSD-209ENST00000470006 PIPP12273 146 aaPredicted RBP15.2■□□□□ 0.02
NCKIPSD-209ENST00000470006 NCK1P16333 377 aa15.2■□□□□ 0.02
NCKIPSD-209ENST00000470006 ARPINQ7Z6K5 226 aa15.2■□□□□ 0.02
NCKIPSD-209ENST00000470006 OR52L1Q8NGH7 329 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms