RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SPTBN2O15020 2390 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 CHD5Q8TDI0 1954 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 ANKRD33BA6NCL7 494 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 TXNDC12O95881 172 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 MAGEA5P43359 124 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 TMEM128Q5BJH2 165 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 UCN2Q96RP3 112 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 NEURL2Q9BR09 285 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 CNTD2Q9H8S5 307 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 B8ZZF3 427 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 IFNA10P01566 189 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 LINC00271P0C7V0 271 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 BAMBIQ13145 260 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 CLINT1Q14677 625 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 SMIM21Q3B7S5 101 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 SLC23A3Q6PIS1 610 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 ACOT7LQ6ZUV0 252 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 SCARB1Q8WTV0 552 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 TCTEX1D2Q8WW35 142 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 ZNF649Q9BS31 505 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 CNTNAP3Q9BZ76 1288 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 A0A1W2PPH5 198 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 PCP4L1A6NKN8 68 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 KRBOX1C9JBD0 128 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 CATSPERDQ86XM0 798 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 TCTE3Q8IZS6 198 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 ARHGAP5-AS1Q96IT6 56 aa12.23□□□□□ -0.45
BRAT1-203ENST00000467558 IL3RAP26951 378 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 SOX8P57073 446 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 SNRPNP63162 240 aaKnown RBP12.22□□□□□ -0.45
BRAT1-203ENST00000467558 ATPAF1Q5TC12 328 aaPredicted RBP12.22□□□□□ -0.45
BRAT1-203ENST00000467558 ZNF529Q6P280 563 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 GLDNQ6ZMI3 551 aaPredicted RBP12.22□□□□□ -0.45
BRAT1-203ENST00000467558 HSD17B11Q8NBQ5 300 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 DEFB108BQ8NET1 73 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 EXTL1Q92935 676 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 SDSLQ96GA7 329 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 DDA1Q9BW61 102 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 GFOD1Q9NXC2 390 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 CSAG2Q9Y5P2 127 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 RIF1Q5UIP0 2472 aaKnown RBP12.22□□□□□ -0.45
BRAT1-203ENST00000467558 CYB5BO43169 146 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 DFFBO76075 338 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 TGM6O95932 706 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 CST2P09228 141 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 RAB5BP61020 215 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 OR2T2Q6IF00 324 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 OR2M7Q8NG81 312 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 PCNPQ8WW12 178 aaKnown RBP12.22□□□□□ -0.45
BRAT1-203ENST00000467558 MARVELD1Q9BSK0 173 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 HEYLQ9NQ87 328 aaPredicted RBP12.22□□□□□ -0.45
BRAT1-203ENST00000467558 HS3ST3B1Q9Y662 390 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 IGHV1-45A0A0A0MS14 117 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 TNFSF12O43508 249 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 TPPPO94811 219 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 HBE1P02100 147 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 SDHBP21912 280 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 AADACP22760 399 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 OR52W1Q6IF63 320 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 TMPRSS7Q7RTY8 843 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 NUFIP2Q7Z417 695 aaKnown RBP12.22□□□□□ -0.45
BRAT1-203ENST00000467558 FAM234AQ9H0X4 552 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 HIPK2Q9H2X6 1198 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 LSM2Q9Y333 95 aaKnown RBP12.22□□□□□ -0.45
BRAT1-203ENST00000467558 DOCK4Q8N1I0 1966 aa12.22□□□□□ -0.45
BRAT1-203ENST00000467558 IGF2P01344 180 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 IGKV3-11P04433 115 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 RPA2P15927 270 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 PIGPP57054 158 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 MRPS34P82930 218 aaKnown RBP12.21□□□□□ -0.45
BRAT1-203ENST00000467558 DBPQ10586 325 aaPredicted RBP12.21□□□□□ -0.45
BRAT1-203ENST00000467558 FAM185AQ8N0U4 392 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 SUMF2Q8NBJ7 301 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 PXT1Q8NFP0 134 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 ZPLD1Q8TCW7 415 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 ANGPTL4Q9BY76 406 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 ADRA2CP18825 462 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 NME2P22392 152 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 KRBOX4Q5JUW0 171 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 TMEM217Q8N7C4 229 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 ZDHHC22Q8N966 263 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 FAM213BQ8TBF2 198 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 ASB5Q8WWX0 329 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 YIPF5Q969M3 257 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 C10orf35Q96D05 121 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 MIXL1Q9H2W2 232 aa12.21□□□□□ -0.45
BRAT1-203ENST00000467558 TBX6O95947 436 aaPredicted RBP12.21□□□□□ -0.46
BRAT1-203ENST00000467558 SP9P0CG40 484 aa12.21□□□□□ -0.46
BRAT1-203ENST00000467558 AGFG1P52594 562 aaKnown RBP12.21□□□□□ -0.46
BRAT1-203ENST00000467558 TAS2R30P59541 319 aa12.21□□□□□ -0.46
BRAT1-203ENST00000467558 TLE4Q04727 773 aa12.21□□□□□ -0.46
BRAT1-203ENST00000467558 TUSC5Q8IXB3 177 aa12.21□□□□□ -0.46
BRAT1-203ENST00000467558 APOBEC4Q8WW27 367 aaKnown RBP12.21□□□□□ -0.46
BRAT1-203ENST00000467558 TAAR5O14804 337 aa12.21□□□□□ -0.46
BRAT1-203ENST00000467558 SNAPINO95295 136 aa12.21□□□□□ -0.46
BRAT1-203ENST00000467558 CD1AP06126 327 aa12.21□□□□□ -0.46
BRAT1-203ENST00000467558 PRDX4Q13162 271 aa12.21□□□□□ -0.46
BRAT1-203ENST00000467558 TMEM268Q5VZI3 342 aa12.21□□□□□ -0.46
BRAT1-203ENST00000467558 ADPRHL1Q8NDY3 354 aa12.21□□□□□ -0.46
BRAT1-203ENST00000467558 DUSP18Q8NEJ0 188 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms