RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 IL18R1Q13478 541 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 PLECQ15149 4684 aaKnown RBP8.07□□□□□ -1.12
HDAC3-203ENST00000467533 TIGD6Q17RP2 521 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 ZBED5Q49AG3 693 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 GPR139Q6DWJ6 353 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 THAP5Q7Z6K1 395 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 FAM156AQ8NDB6 213 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 CHPT1Q8WUD6 406 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 LINC00476Q8WZB0 136 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 STMN2Q93045 179 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 RNFT2Q96EX2 444 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 SDSLQ96GA7 329 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 NOL4LQ96MY1 436 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-203ENST00000467533 RBM14Q96PK6 669 aaKnown RBP8.07□□□□□ -1.12
HDAC3-203ENST00000467533 TBC1D23Q9NUY8 699 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 CCDC167Q9P0B6 97 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 CYB5R1Q9UHQ9 305 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 BAG5Q9UL15 447 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 A4GNTQ9UNA3 340 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 TMEM210A6NLX4 147 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 C17orf98A8MV24 154 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 SLC1A7O00341 560 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 CDC42EP2O14613 210 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 LY6G6CO95867 125 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 AMY1AP04745 511 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 AMY2AP04746 511 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 BRS3P32247 399 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 CDKN2AP42771 156 aaKnown RBP8.06□□□□□ -1.12
HDAC3-203ENST00000467533 PRKXP51817 358 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 FAM3AP98173 230 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 NFYCQ13952 458 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 SNAPC1Q16533 368 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 LCN8Q6JVE9 175 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 BLOC1S3Q6QNY0 202 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 LCNL1Q6ZST4 164 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 SLC16A9Q7RTY1 509 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 FUNDC1Q8IVP5 155 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 IL17DQ8TAD2 202 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 PRRC1Q96M27 445 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 C16orf45Q96MC5 204 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-203ENST00000467533 PAIP2Q9BPZ3 127 aaKnown RBP8.06□□□□□ -1.12
HDAC3-203ENST00000467533 COPS4Q9BT78 406 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 SRA1Q9HD15 236 aaKnown RBP8.06□□□□□ -1.12
HDAC3-203ENST00000467533 B9D1Q9UPM9 204 aa8.06□□□□□ -1.12
HDAC3-203ENST00000467533 MEX3AA1L020 520 aaKnown RBP8.05□□□□□ -1.12
HDAC3-203ENST00000467533 TRIM64CA6NLI5 447 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 SERPINE3A8MV23 424 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 PRR23D1E9PI22 279 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-203ENST00000467533 M0QZK8 103 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 SLC22A2O15244 555 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 PTP4A3O75365 173 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 NDUFB2O95178 105 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 PRR23D2P0DMB1 279 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-203ENST00000467533 OTX1P32242 354 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-203ENST00000467533 INSL3P51460 131 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 ARHGDIBP52566 201 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 DLX6P56179 175 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 ACTA2P62736 377 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 ACTG2P63267 376 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 ACTC1P68032 377 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 ACTA1P68133 377 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 GFOD2Q3B7J2 385 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 ZNF730Q6ZMV8 503 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 CALHM1Q8IU99 346 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 EGFL6Q8IUX8 553 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 FTMTQ8N4E7 242 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 COMMD1Q8N668 190 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 OR4C15Q8NGM1 316 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 SPSB4Q96A44 273 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 REEP6Q96HR9 211 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 SPATA25Q9BR10 227 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 NRIP3Q9NQ35 241 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 RHCGQ9UBD6 479 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 LINC00527Q9UJ94 153 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 RHBDD3Q9Y3P4 386 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 IER3IP1Q9Y5U9 82 aa8.05□□□□□ -1.12
HDAC3-203ENST00000467533 SIRT4Q9Y6E7 314 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-203ENST00000467533 hCG_38984A0A1B0GV85 526 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 DNAJC8O75937 253 aaPredicted RBP8.04□□□□□ -1.12
HDAC3-203ENST00000467533 RENP00797 406 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 RBP4P02753 201 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 IFNA6P05013 189 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 ZNF728P0DKX0 622 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 GP9P14770 177 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 HTR1DP28221 377 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 RPS27P42677 84 aaKnown RBP8.04□□□□□ -1.12
HDAC3-203ENST00000467533 RPS6KA3P51812 740 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 SLC18A1P54219 525 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 PRDX4Q13162 271 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 TRAM2Q15035 370 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 TAF13Q15543 124 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 SRSF7Q16629 238 aaKnown RBP eCLIP8.04□□□□□ -1.12
HDAC3-203ENST00000467533 VMACQ2NL98 169 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 DLEU7Q6UYE1 221 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 ZDHHC21Q8IVQ6 265 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 ZNF561Q8N587 486 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 CSNK2A3Q8NEV1 391 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 RNF170Q96K19 258 aa8.04□□□□□ -1.12
HDAC3-203ENST00000467533 GPX7Q96SL4 187 aaPredicted RBP8.04□□□□□ -1.12
HDAC3-203ENST00000467533 DCLRE1BQ9H816 532 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms