RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 LRRC8AQ8IWT6 810 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 SLC30A8Q8IWU4 369 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 SNF8Q96H20 258 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 FAM19A4Q96LR4 140 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 RDH12Q96NR8 316 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 SCGB3A2Q96PL1 93 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 TBL1XR1Q9BZK7 514 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 ABCG5Q9H222 651 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 SND1-IT1Q9HBX3 110 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 OR2S2Q9NQN1 319 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 INIPQ9NRY2 104 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 TREX1Q9NSU2 369 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 C20orf96Q9NUD7 363 aaPredicted RBP1.56□□□□□ -2.16
SMC4-207ENST00000467263 TMEM100Q9NV29 134 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 CES1P1Q9UKY3 287 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 INSRP06213 1382 aa1.56□□□□□ -2.16
SMC4-207ENST00000467263 TMEM72A0PK05 275 aa1.55□□□□□ -2.16
SMC4-207ENST00000467263 J3QKU1 62 aa1.55□□□□□ -2.16
SMC4-207ENST00000467263 CPSF4O95639 269 aaKnown RBP1.55□□□□□ -2.16
SMC4-207ENST00000467263 PTHP01270 115 aa1.55□□□□□ -2.16
SMC4-207ENST00000467263 PRSS3P35030 304 aa1.55□□□□□ -2.16
SMC4-207ENST00000467263 INCA1Q0VD86 236 aa1.55□□□□□ -2.16
SMC4-207ENST00000467263 ITIH4Q14624 930 aa1.55□□□□□ -2.16
SMC4-207ENST00000467263 RCN1Q15293 331 aa1.55□□□□□ -2.16
SMC4-207ENST00000467263 STEAP4Q687X5 459 aa1.55□□□□□ -2.16
SMC4-207ENST00000467263 TMEM53Q6P2H8 277 aa1.55□□□□□ -2.16
SMC4-207ENST00000467263 METAP1DQ6UB28 335 aaPredicted RBP1.55□□□□□ -2.16
SMC4-207ENST00000467263 SSX9Q7RTT3 188 aa1.55□□□□□ -2.16
SMC4-207ENST00000467263 PAGE2Q7Z2X7 111 aa1.55□□□□□ -2.16
SMC4-207ENST00000467263 PQLC3Q8N755 202 aa1.55□□□□□ -2.16
SMC4-207ENST00000467263 ZFP62Q8NB50 900 aaPredicted RBP1.55□□□□□ -2.16
SMC4-207ENST00000467263 SFXN5Q8TD22 340 aa1.55□□□□□ -2.16
SMC4-207ENST00000467263 CSPG4P5Q96PW8 444 aa1.55□□□□□ -2.16
SMC4-207ENST00000467263 DERL3Q96Q80 235 aa1.55□□□□□ -2.16
SMC4-207ENST00000467263 NLE1Q9NVX2 485 aaPredicted RBP1.55□□□□□ -2.16
SMC4-207ENST00000467263 MCUBQ9NWR8 336 aa1.55□□□□□ -2.16
SMC4-207ENST00000467263 MYEF2Q9P2K5 600 aaKnown RBP1.55□□□□□ -2.16
SMC4-207ENST00000467263 STX18Q9P2W9 335 aaKnown RBP1.55□□□□□ -2.16
SMC4-207ENST00000467263 NDRG2Q9UN36 371 aaKnown RBP1.55□□□□□ -2.16
SMC4-207ENST00000467263 DYSFO75923 2080 aa1.54□□□□□ -2.16
SMC4-207ENST00000467263 IGHV6-1A0A0B4J1U7 121 aa1.54□□□□□ -2.16
SMC4-207ENST00000467263 A0A0G2JMP0 313 aa1.54□□□□□ -2.16
SMC4-207ENST00000467263 A0A0X1KG70 313 aa1.54□□□□□ -2.16
SMC4-207ENST00000467263 D6RAR5 112 aa1.54□□□□□ -2.16
SMC4-207ENST00000467263 MYL12BO14950 172 aa1.54□□□□□ -2.16
SMC4-207ENST00000467263 CACNG3O60359 315 aa1.54□□□□□ -2.16
SMC4-207ENST00000467263 FARS2O95363 451 aaKnown RBP1.54□□□□□ -2.16
SMC4-207ENST00000467263 RGS6P49758 472 aa1.54□□□□□ -2.16
SMC4-207ENST00000467263 ATP5G2Q06055 141 aa1.54□□□□□ -2.16
SMC4-207ENST00000467263 KRTAP25-1Q3LHN0 102 aa1.54□□□□□ -2.16
SMC4-207ENST00000467263 OR8K3Q8NH51 312 aa1.54□□□□□ -2.16
SMC4-207ENST00000467263 ITLN2Q8WWU7 325 aaPredicted RBP1.54□□□□□ -2.16
SMC4-207ENST00000467263 NAPGQ99747 312 aaPredicted RBP1.54□□□□□ -2.16
SMC4-207ENST00000467263 LTBP2Q14767 1821 aa1.54□□□□□ -2.16
SMC4-207ENST00000467263 A0A075B6Q4 140 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 LINC01619G3V211 115 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 IGHMP01871 453 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 SEC11BP0C7V7 166 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 UBCP0CG48 685 aaKnown RBP1.53□□□□□ -2.16
SMC4-207ENST00000467263 PRPS1L1P21108 318 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 GSTM3P21266 225 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 GRB2P62993 217 aaKnown RBP1.53□□□□□ -2.16
SMC4-207ENST00000467263 IL5RAQ01344 420 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 MAPRE2Q15555 327 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 TSC22D1Q15714 1073 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 RPEL1Q2QD12 228 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 KRTAP13-4Q3LI77 160 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 BZW1Q7L1Q6 419 aaKnown RBP1.53□□□□□ -2.16
SMC4-207ENST00000467263 RNF10Q8N5U6 811 aaKnown RBP1.53□□□□□ -2.16
SMC4-207ENST00000467263 WDR31Q8NA23 367 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 OR1S1Q8NH92 325 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 ITFG1Q8TB96 612 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 APH1AQ96BI3 265 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 RCN3Q96D15 328 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 BPIFA3Q9BQP9 254 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 TMEM175Q9BSA9 504 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 AGMATQ9BSE5 352 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 REEP1Q9H902 201 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 FANCEQ9HB96 536 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 ZNF608Q9ULD9 1512 aaPredicted RBP1.53□□□□□ -2.16
SMC4-207ENST00000467263 PPIL1Q9Y3C6 166 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 ENPP4Q9Y6X5 453 aa1.53□□□□□ -2.16
SMC4-207ENST00000467263 SSH2Q76I76 1423 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 ELP1O95163 1332 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 CTAGE15A4D2H0 777 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 XRCC2O43543 280 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 CD99P14209 185 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 ADIGQ0VDE8 80 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 CTAGE6Q86UF2 777 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 ITPRIPQ8IWB1 547 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 BBS5Q8N3I7 341 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 Q8NDZ9 215 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 CCDC148Q8NFR7 591 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 OR2M7Q8NG81 312 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 YIPF5Q969M3 257 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 ISG20Q96AZ6 181 aaKnown RBP1.52□□□□□ -2.17
SMC4-207ENST00000467263 FXYD5Q96DB9 178 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 MRPL48Q96GC5 212 aaKnown RBP1.52□□□□□ -2.17
SMC4-207ENST00000467263 UBE2E2Q96LR5 201 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 JSRP1Q96MG2 331 aaPredicted RBP1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms