RNA–Protein interactions for RNA: ENST00000466159.6

SYNE1-217, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-217ENST00000466159 ARRDC1Q8N5I2 433 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 ESX1Q8N693 406 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 OR13G1Q8NGZ3 307 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 PP6455Q8WZ26 134 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 HAS2Q92819 552 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 SPTSSAQ969W0 71 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 INTS12Q96CB8 462 aaKnown RBP7.82□□□□□ -1.16
SYNE1-217ENST00000466159 ALKBH3Q96Q83 286 aaPredicted RBP7.82□□□□□ -1.16
SYNE1-217ENST00000466159 PECRQ9BY49 303 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 GPR173Q9NS66 373 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 MBD2Q9UBB5 411 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 PCSK5Q92824 1860 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 KANTRA0A1W2PQU2 76 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 CDK2AP1O14519 115 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 SGCEO43556 437 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 OR2F2O95006 317 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 B4GALT1P15291 398 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 OR3A2P47893 321 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 OR2F1Q13607 317 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 ZNF345Q14585 488 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 SLC9A3R2Q15599 337 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 FAM189A2Q15884 450 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 DCAF12Q5T6F0 453 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 Q6ZSR3 168 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 ACOT7LQ6ZUV0 252 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 C6orf201Q7Z4U5 140 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 GLRX5Q86SX6 157 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 CSNK2A3Q8NEV1 391 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 THAP6Q8TBB0 222 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 S100A13Q99584 98 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 RTBDNQ9BSG5 229 aaPredicted RBP7.82□□□□□ -1.16
SYNE1-217ENST00000466159 SF3B5Q9BWJ5 86 aaKnown RBP7.82□□□□□ -1.16
SYNE1-217ENST00000466159 DEPPQ9NTK1 212 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 GHRLQ9UBU3 117 aa7.82□□□□□ -1.16
SYNE1-217ENST00000466159 LRRC3CA6NJW4 275 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 ZNF716A6NP11 495 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 B8ZZF3 427 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 BCL2L11O43521 198 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 SYNGR3O43761 229 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 MTRF1O75570 445 aaKnown RBP7.81□□□□□ -1.16
SYNE1-217ENST00000466159 HPP00738 406 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 ZP3P21754 424 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 CRYGSP22914 178 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 GABRR1P24046 479 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 CLDN15P56746 228 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 TAS2R31P59538 309 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 UBA52P62987 128 aaKnown RBP7.81□□□□□ -1.16
SYNE1-217ENST00000466159 ZXDAP98168 799 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 ACTBL2Q562R1 376 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 ACER2Q5QJU3 275 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 AADACL3Q5VUY0 350 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 CLEC18BQ6UXF7 455 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 SLC16A14Q7RTX9 510 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 GALNTL5Q7Z4T8 443 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 TMEM105Q8N8V8 129 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 GALNT11Q8NCW6 608 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 AKR7LQ8NHP1 331 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 CT55Q8WUE5 264 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 ZNF471Q9BX82 626 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-217ENST00000466159 GPR160Q9UJ42 338 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 LOXL2Q9Y4K0 774 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 SPEF1Q9Y4P9 236 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 TECTAO75443 2155 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 AHCTF1Q8WYP5 2266 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 IGKV1D-8A0A087WSZ0 117 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 PINLYPA6NC86 204 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 CEACAM18A8MTB9 384 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 MPTX1A8MV57 137 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 A8MXK9 166 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 B4E171 279 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 ANGPTL7O43827 346 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 ADAP1O75689 374 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 PLATP00750 562 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 APOC1P02654 83 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 CRHP06850 196 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 FGF2P09038 288 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 ZNF32P17041 273 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 GLRA1P23415 457 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 NUP62P37198 522 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-217ENST00000466159 TSPAN7P41732 249 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 CBX5P45973 191 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 MTCP1P56278 107 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 SUPT4H1P63272 117 aaKnown RBP7.81□□□□□ -1.16
SYNE1-217ENST00000466159 CHAF1BQ13112 559 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 AAED1Q7RTV5 226 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 LHFPL1Q86WI0 220 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 GPR137CQ8N3F9 429 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 BVESQ8NE79 360 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 TMEM185AQ8NFB2 350 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 SEMA6DQ8NFY4 1073 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 OR52H1Q8NGJ2 320 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 OR10D3Q8NH80 312 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 FGFBP3Q8TAT2 258 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 RHBDD1Q8TEB9 315 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 REEP6Q96HR9 211 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 HDHD3Q9BSH5 251 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-217ENST00000466159 TM2D1Q9BX74 207 aa7.81□□□□□ -1.16
SYNE1-217ENST00000466159 CHMP1AQ9HD42 196 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-217ENST00000466159 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.81□□□□□ -1.16
SYNE1-217ENST00000466159 ZNF701Q9NV72 531 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms