RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 FAM53BQ14153 422 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 MAPRE2Q15555 327 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 KLHL40Q2TBA0 621 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 KDM4DQ6B0I6 523 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 MORN3Q6PF18 240 aaPredicted RBP2.07□□□□□ -2.08
LRCH3-211ENST00000466054 MRPL21Q7Z2W9 205 aaKnown RBP2.07□□□□□ -2.08
LRCH3-211ENST00000466054 TRAM1L1Q8N609 369 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 PROKR2Q8NFJ6 384 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 AGR3Q8TD06 166 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 PEX13Q92968 403 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 ISG20Q96AZ6 181 aaKnown RBP2.07□□□□□ -2.08
LRCH3-211ENST00000466054 TMEM159Q96B96 161 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 PDCD1LG2Q9BQ51 273 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 IL22Q9GZX6 179 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 NCOR1P1Q9H4R4 102 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 PRSS16Q9NQE7 514 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 FBXO8Q9NRD0 319 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 NDRG2Q9UN36 371 aaKnown RBP2.07□□□□□ -2.08
LRCH3-211ENST00000466054 PHLPP2Q6ZVD8 1323 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 PLEKHG2Q9H7P9 1386 aa2.07□□□□□ -2.08
LRCH3-211ENST00000466054 HIVEP2P31629 2446 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 IGHV6-1A0A0B4J1U7 121 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 NCF1BA6NI72 391 aaPredicted RBP2.06□□□□□ -2.08
LRCH3-211ENST00000466054 NCF1CA8MVU1 366 aaPredicted RBP2.06□□□□□ -2.08
LRCH3-211ENST00000466054 CNMDO75829 334 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 SLC35G6P0C7Q6 338 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 COL8A2P25067 703 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 IL3RAP26951 378 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 ARL2P36404 184 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 DAOAP59103 153 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 C2orf54Q08AI8 447 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 ZNF235Q14590 738 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 SP6Q3SY56 376 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 FAM104BQ5XKR9 115 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 TBPL2Q6SJ96 375 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 TMEM136Q6ZRR5 245 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 SGPP2Q8IWX5 399 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 TVP23CQ96ET8 276 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 NAPGQ99747 312 aaPredicted RBP2.06□□□□□ -2.08
LRCH3-211ENST00000466054 SEC22CQ9BRL7 303 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 ANGPTL4Q9BY76 406 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 NAA50Q9GZZ1 169 aaKnown RBP2.06□□□□□ -2.08
LRCH3-211ENST00000466054 BLZF1Q9H2G9 400 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 OR51B5Q9H339 312 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 CHRAC1Q9NRG0 131 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 PSME2Q9UL46 239 aa2.06□□□□□ -2.08
LRCH3-211ENST00000466054 ZNF608Q9ULD9 1512 aaPredicted RBP2.06□□□□□ -2.08
LRCH3-211ENST00000466054 LOXHD1Q8IVV2 1947 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 THADAQ6YHU6 1953 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 SEC16AO15027 2179 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 TMEM72A0PK05 275 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.05□□□□□ -2.08
LRCH3-211ENST00000466054 ZNF701M0R085 212 aaPredicted RBP2.05□□□□□ -2.08
LRCH3-211ENST00000466054 IGHV1-46P01743 117 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 KLK1P06870 262 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 PFN1P07737 140 aaKnown RBP2.05□□□□□ -2.08
LRCH3-211ENST00000466054 HLA-DMAP28067 261 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 TGM4P49221 684 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 SLC35A1P78382 337 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 TSC22D1Q15714 1073 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 TAF9Q16594 264 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 HHATQ5VTY9 493 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 BRD3OSQ6XYD6 125 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 BBS7Q8IWZ6 715 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 SLC7A5P1Q8MH63 180 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 PIH1D2Q8WWB5 315 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 CERS2Q96G23 380 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 TBL1XR1Q9BZK7 514 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 ARV1Q9H2C2 271 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 RWDD2AQ9UIY3 292 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 RAB22AQ9UL26 194 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 TTC41PQ6P2S7 1318 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 SBNO1A3KN83 1393 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 NID2Q14112 1375 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 NPHP4O75161 1426 aaPredicted RBP2.05□□□□□ -2.08
LRCH3-211ENST00000466054 SVILO95425 2214 aa2.05□□□□□ -2.08
LRCH3-211ENST00000466054 CENPXA8MT69 81 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 PMCHP20382 165 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 MSR1P21757 451 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 GABRR2P28476 465 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 MTPNP58546 118 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 LCN2P80188 198 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 BIKQ13323 160 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 HIKESHIQ53FT3 197 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 TMEM69Q5SWH9 247 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 MLIPQ5VWP3 458 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 TTC19Q6DKK2 380 aaPredicted RBP2.04□□□□□ -2.08
LRCH3-211ENST00000466054 APOBEC3HQ6NTF7 200 aaKnown RBP2.04□□□□□ -2.08
LRCH3-211ENST00000466054 OR2W3Q7Z3T1 314 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 DAZ4Q86SG3 579 aaKnown RBP2.04□□□□□ -2.08
LRCH3-211ENST00000466054 LINC00469Q8N7U9 141 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 TMEM234Q8WY98 164 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 ZBED3Q96IU2 234 aaPredicted RBP2.04□□□□□ -2.08
LRCH3-211ENST00000466054 TM2D3Q9BRN9 247 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 SHANK2-AS3Q9BTD1 123 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 STMN4Q9H169 189 aaPredicted RBP2.04□□□□□ -2.08
LRCH3-211ENST00000466054 RGCCQ9H4X1 137 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 ARMC7Q9H6L4 198 aa2.04□□□□□ -2.08
LRCH3-211ENST00000466054 DAZ1Q9NQZ3 744 aaKnown RBP2.04□□□□□ -2.08
LRCH3-211ENST00000466054 VAX2Q9UIW0 290 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms