RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 LANCL2Q9NS86 450 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 TMEM184BQ9Y519 407 aaPredicted RBP17.4■□□□□ 0.38
SDF4-205ENST00000465727 CRYM-AS1A6NIL9 109 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 FOXI3A8MTJ6 420 aaPredicted RBP17.4■□□□□ 0.38
SDF4-205ENST00000465727 ZNF878C9JN71 531 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 RRP8O43159 456 aaKnown RBP17.4■□□□□ 0.38
SDF4-205ENST00000465727 GPR137BO60478 399 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 DDAH2O95865 285 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 DNLZQ5SXM8 178 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 MFSD8Q8NHS3 518 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 SSC4DQ8WTU2 575 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 TMEM234Q8WY98 164 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 SLC2A4RGQ9NR83 387 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 PARPBPQ9NWS1 579 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 GAR1Q9NY12 217 aaKnown RBP17.4■□□□□ 0.38
SDF4-205ENST00000465727 TMED3Q9Y3Q3 217 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 PHF3Q92576 2039 aaKnown RBP17.39■□□□□ 0.38
SDF4-205ENST00000465727 SLC2A1P11166 492 aa17.39■□□□□ 0.37
SDF4-205ENST00000465727 ALDH3B1P43353 468 aa17.39■□□□□ 0.37
SDF4-205ENST00000465727 HSF1Q00613 529 aa17.39■□□□□ 0.37
SDF4-205ENST00000465727 PYY3Q5JQD4 70 aa17.39■□□□□ 0.37
SDF4-205ENST00000465727 RNF144BQ7Z419 303 aa17.39■□□□□ 0.37
SDF4-205ENST00000465727 ABHD12BQ7Z5M8 362 aaPredicted RBP17.39■□□□□ 0.37
SDF4-205ENST00000465727 PPP1R3BQ86XI6 285 aa17.39■□□□□ 0.37
SDF4-205ENST00000465727 OR51T1Q8NGJ9 327 aa17.39■□□□□ 0.37
SDF4-205ENST00000465727 TGM7Q96PF1 710 aa17.39■□□□□ 0.37
SDF4-205ENST00000465727 GPER1Q99527 375 aa17.39■□□□□ 0.37
SDF4-205ENST00000465727 BCO1Q9HAY6 547 aa17.39■□□□□ 0.37
SDF4-205ENST00000465727 DECR2Q9NUI1 292 aa17.39■□□□□ 0.37
SDF4-205ENST00000465727 PCNX3Q9H6A9 2034 aa17.39■□□□□ 0.37
SDF4-205ENST00000465727 MASP2O00187 686 aa17.38■□□□□ 0.37
SDF4-205ENST00000465727 PRH1P02810 166 aa17.38■□□□□ 0.37
SDF4-205ENST00000465727 CCL1P22362 96 aa17.38■□□□□ 0.37
SDF4-205ENST00000465727 GPX4P36969 197 aaPredicted RBP17.38■□□□□ 0.37
SDF4-205ENST00000465727 POU3F1Q03052 451 aaPredicted RBP17.38■□□□□ 0.37
SDF4-205ENST00000465727 SOHLH1Q5JUK2 328 aa17.38■□□□□ 0.37
SDF4-205ENST00000465727 COMMD2Q86X83 199 aa17.38■□□□□ 0.37
SDF4-205ENST00000465727 HS3ST3A1Q9Y663 406 aa17.38■□□□□ 0.37
SDF4-205ENST00000465727 A0A1W2PP11 408 aa17.38■□□□□ 0.37
SDF4-205ENST00000465727 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.38■□□□□ 0.37
SDF4-205ENST00000465727 GALNTL5Q7Z4T8 443 aa17.38■□□□□ 0.37
SDF4-205ENST00000465727 SEMA6DQ8NFY4 1073 aa17.38■□□□□ 0.37
SDF4-205ENST00000465727 DAZLQ92904 295 aaKnown RBP17.38■□□□□ 0.37
SDF4-205ENST00000465727 TCEAL2Q9H3H9 227 aaPredicted RBP17.38■□□□□ 0.37
SDF4-205ENST00000465727 KLHL13Q9P2N7 655 aa17.38■□□□□ 0.37
SDF4-205ENST00000465727 FBXO7Q9Y3I1 522 aa17.38■□□□□ 0.37
SDF4-205ENST00000465727 C5orf42Q9H799 3197 aa17.38■□□□□ 0.37
SDF4-205ENST00000465727 A0A087WWC5 75 aa17.37■□□□□ 0.37
SDF4-205ENST00000465727 IGKV3D-11A0A0A0MRZ8 115 aa17.37■□□□□ 0.37
SDF4-205ENST00000465727 IL11P20809 199 aa17.37■□□□□ 0.37
SDF4-205ENST00000465727 ITGA3P26006 1051 aa17.37■□□□□ 0.37
SDF4-205ENST00000465727 RPS10P46783 165 aaKnown RBP17.37■□□□□ 0.37
SDF4-205ENST00000465727 CD81P60033 236 aa17.37■□□□□ 0.37
SDF4-205ENST00000465727 ACY1Q03154 408 aa17.37■□□□□ 0.37
SDF4-205ENST00000465727 C9orf152Q5JTZ5 239 aa17.37■□□□□ 0.37
SDF4-205ENST00000465727 SUMF2Q8NBJ7 301 aa17.37■□□□□ 0.37
SDF4-205ENST00000465727 MRPL24Q96A35 216 aaKnown RBP17.37■□□□□ 0.37
SDF4-205ENST00000465727 MUCL1Q96DR8 90 aa17.37■□□□□ 0.37
SDF4-205ENST00000465727 PECRQ9BY49 303 aa17.37■□□□□ 0.37
SDF4-205ENST00000465727 CHD7Q9P2D1 2997 aa17.37■□□□□ 0.37
SDF4-205ENST00000465727 CDC14CA4D256 554 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 HPNP05981 417 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 GABRA4P48169 554 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 DOK3Q7L591 496 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 C9orf40Q8IXQ3 194 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 TMEM156Q8N614 296 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 OR8G5Q8NG78 346 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 SHDQ96IW2 340 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 WDR77Q9BQA1 342 aaPredicted RBP17.36■□□□□ 0.37
SDF4-205ENST00000465727 CHST11Q9NPF2 352 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 GPR84Q9NQS5 396 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 YIF1AO95070 293 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 SCGB1D2O95969 90 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 MBPP02686 304 aaPredicted RBP17.36■□□□□ 0.37
SDF4-205ENST00000465727 CELA2BP08218 269 aaPredicted RBP17.36■□□□□ 0.37
SDF4-205ENST00000465727 GIMD1P0DJR0 217 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 BLVRBP30043 206 aaPredicted RBP17.36■□□□□ 0.37
SDF4-205ENST00000465727 TLE3Q04726 772 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 IL13RA2Q14627 380 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 C14orf28Q4W4Y0 310 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 LCN10Q6JVE6 187 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 OR13H1Q8NG92 308 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 OR8B12Q8NGG6 310 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 OR2AJ1Q8NGZ0 328 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 MAFIPQ8WZ33 124 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 ST8SIA1Q92185 356 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 ZNF2Q9BSG1 426 aaPredicted RBP17.36■□□□□ 0.37
SDF4-205ENST00000465727 WWTR1Q9GZV5 400 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 UFSP2Q9NUQ7 469 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 MED29Q9NX70 200 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 GFOD1Q9NXC2 390 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 KCNIP3Q9Y2W7 256 aa17.36■□□□□ 0.37
SDF4-205ENST00000465727 IFITM10A6NMD0 228 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 SEC14L6B5MCN3 397 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 OR13C7P0DN81 318 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 FHITP49789 147 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 THEM4Q5T1C6 240 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 ZNF574Q6ZN55 896 aaPredicted RBP17.35■□□□□ 0.37
SDF4-205ENST00000465727 SPRED2Q7Z698 418 aa17.35■□□□□ 0.37
SDF4-205ENST00000465727 WDFY1Q8IWB7 410 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms