RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 RAB39BQ96DA2 213 aa16.69■□□□□ 0.26
COL9A3-204ENST00000463487 PDCD1LG2Q9BQ51 273 aa16.69■□□□□ 0.26
COL9A3-204ENST00000463487 YTHDF1Q9BYJ9 559 aaKnown RBP16.69■□□□□ 0.26
COL9A3-204ENST00000463487 A0A096LNT2 108 aa16.68■□□□□ 0.26
COL9A3-204ENST00000463487 IGHV4-61A0A0C4DH41 118 aa16.68■□□□□ 0.26
COL9A3-204ENST00000463487 ZNF732B4DXR9 585 aa16.68■□□□□ 0.26
COL9A3-204ENST00000463487 OGG1O15527 345 aa16.68■□□□□ 0.26
COL9A3-204ENST00000463487 FSTL3O95633 263 aa16.68■□□□□ 0.26
COL9A3-204ENST00000463487 MDH2P40926 338 aaKnown RBP16.68■□□□□ 0.26
COL9A3-204ENST00000463487 GZMKP49863 264 aa16.68■□□□□ 0.26
COL9A3-204ENST00000463487 GABARAPL2P60520 117 aa16.68■□□□□ 0.26
COL9A3-204ENST00000463487 SPHARQ15513 63 aa16.68■□□□□ 0.26
COL9A3-204ENST00000463487 ZNF573Q86YE8 665 aa16.68■□□□□ 0.26
COL9A3-204ENST00000463487 GPR173Q9NS66 373 aa16.68■□□□□ 0.26
COL9A3-204ENST00000463487 PAK1IP1Q9NWT1 392 aaPredicted RBP16.68■□□□□ 0.26
COL9A3-204ENST00000463487 ERVK-18Q9QC07 812 aa16.68■□□□□ 0.26
COL9A3-204ENST00000463487 PCDHB10Q9UN67 800 aa16.68■□□□□ 0.26
COL9A3-204ENST00000463487 PPIAL4EA0A075B759 164 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 PPIAL4DF5H284 164 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 MRPS14O60783 128 aaKnown RBP16.67■□□□□ 0.26
COL9A3-204ENST00000463487 CYB5R3P00387 301 aaPredicted RBP16.67■□□□□ 0.26
COL9A3-204ENST00000463487 PPIAL4FP0DN26 164 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 THBS2P35442 1172 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 MED22Q15528 200 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 TMEM249Q2WGJ8 235 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 TMEM155Q4W5P6 130 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 UTS2BQ765I0 119 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 ZNF485Q8NCK3 441 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 MAPK1IP1LQ8NDC0 245 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 OR5D14Q8NGL3 314 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 RPS4Y2Q8TD47 263 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 THRSPQ92748 146 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 FGGYQ96C11 551 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 TLNRD1Q9H1K6 362 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 NARFLQ9H6Q4 476 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 PPP1R3EQ9H7J1 279 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 ZNF281Q9Y2X9 895 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 PPIAL4AQ9Y536 164 aa16.67■□□□□ 0.26
COL9A3-204ENST00000463487 A6NIN4 97 aa16.66■□□□□ 0.26
COL9A3-204ENST00000463487 IGHV2-70P01814 119 aa16.66■□□□□ 0.26
COL9A3-204ENST00000463487 PRKACBP22694 351 aa16.66■□□□□ 0.26
COL9A3-204ENST00000463487 FUT6P51993 359 aa16.66■□□□□ 0.26
COL9A3-204ENST00000463487 ACSM1Q08AH1 577 aa16.66■□□□□ 0.26
COL9A3-204ENST00000463487 YIF1BQ5BJH7 314 aa16.66■□□□□ 0.26
COL9A3-204ENST00000463487 FAM76BQ5HYJ3 339 aa16.66■□□□□ 0.26
COL9A3-204ENST00000463487 DMKNQ6E0U4 476 aaPredicted RBP16.66■□□□□ 0.26
COL9A3-204ENST00000463487 WDR86Q86TI4 376 aa16.66■□□□□ 0.26
COL9A3-204ENST00000463487 SERPINA12Q8IW75 414 aa16.66■□□□□ 0.26
COL9A3-204ENST00000463487 OR51A4Q8NGJ6 313 aa16.66■□□□□ 0.26
COL9A3-204ENST00000463487 CLDND2Q8NHS1 167 aa16.66■□□□□ 0.26
COL9A3-204ENST00000463487 ZNF671Q8TAW3 534 aa16.66■□□□□ 0.26
COL9A3-204ENST00000463487 SPSB1Q96BD6 273 aa16.66■□□□□ 0.26
COL9A3-204ENST00000463487 BORCS8Q96FH0 119 aa16.66■□□□□ 0.26
COL9A3-204ENST00000463487 DCAF16Q9NXF7 216 aa16.66■□□□□ 0.26
COL9A3-204ENST00000463487 POLDIP2Q9Y2S7 368 aa16.66■□□□□ 0.26
COL9A3-204ENST00000463487 FLNAP21333 2647 aaKnown RBP16.65■□□□□ 0.26
COL9A3-204ENST00000463487 CDIPTO14735 213 aa16.65■□□□□ 0.26
COL9A3-204ENST00000463487 MT-ND2P03891 347 aa16.65■□□□□ 0.26
COL9A3-204ENST00000463487 CELP19835 753 aa16.65■□□□□ 0.26
COL9A3-204ENST00000463487 CPT2P23786 658 aa16.65■□□□□ 0.26
COL9A3-204ENST00000463487 CFHR2P36980 270 aa16.65■□□□□ 0.26
COL9A3-204ENST00000463487 PMELP40967 661 aa16.65■□□□□ 0.26
COL9A3-204ENST00000463487 XAF1Q6GPH4 301 aa16.65■□□□□ 0.26
COL9A3-204ENST00000463487 CLEC9AQ6UXN8 241 aa16.65■□□□□ 0.26
COL9A3-204ENST00000463487 LRRC28Q86X40 367 aaPredicted RBP16.65■□□□□ 0.26
COL9A3-204ENST00000463487 SVOPQ8N4V2 548 aa16.65■□□□□ 0.26
COL9A3-204ENST00000463487 BOLLQ8N9W6 283 aaKnown RBP16.65■□□□□ 0.26
COL9A3-204ENST00000463487 OR10Z1Q8NGY1 313 aa16.65■□□□□ 0.26
COL9A3-204ENST00000463487 OR10AC1Q8NH08 325 aa16.65■□□□□ 0.26
COL9A3-204ENST00000463487 LRRC29Q8WV35 223 aa16.65■□□□□ 0.26
COL9A3-204ENST00000463487 GHSRQ92847 366 aa16.65■□□□□ 0.26
COL9A3-204ENST00000463487 ADAT3Q96EY9 351 aaPredicted RBP16.65■□□□□ 0.26
COL9A3-204ENST00000463487 CPNE2Q96FN4 548 aaPredicted RBP16.65■□□□□ 0.26
COL9A3-204ENST00000463487 UBAP1Q9NZ09 502 aa16.65■□□□□ 0.26
COL9A3-204ENST00000463487 F8P00451 2351 aa16.65■□□□□ 0.26
COL9A3-204ENST00000463487 TRAV38-1A0A0B4J264 116 aa16.64■□□□□ 0.25
COL9A3-204ENST00000463487 FAM230AA0A1W2PPH8 454 aa16.64■□□□□ 0.25
COL9A3-204ENST00000463487 PLPP2O43688 288 aa16.64■□□□□ 0.25
COL9A3-204ENST00000463487 LMX1BO60663 402 aa16.64■□□□□ 0.25
COL9A3-204ENST00000463487 LALBAP00709 142 aa16.64■□□□□ 0.25
COL9A3-204ENST00000463487 CD1AP06126 327 aa16.64■□□□□ 0.25
COL9A3-204ENST00000463487 HAAOP46952 286 aa16.64■□□□□ 0.25
COL9A3-204ENST00000463487 IRF3Q14653 427 aa16.64■□□□□ 0.25
COL9A3-204ENST00000463487 ZMYND11Q15326 602 aa16.64■□□□□ 0.25
COL9A3-204ENST00000463487 TBCEQ15813 527 aaPredicted RBP16.64■□□□□ 0.25
COL9A3-204ENST00000463487 CYB5R2Q6BCY4 276 aa16.64■□□□□ 0.25
COL9A3-204ENST00000463487 WDR82Q6UXN9 313 aa16.64■□□□□ 0.25
COL9A3-204ENST00000463487 ZNF826PQ6ZT77 177 aa16.64■□□□□ 0.25
COL9A3-204ENST00000463487 SCCPDHQ8NBX0 429 aa16.64■□□□□ 0.25
COL9A3-204ENST00000463487 DNAAF1Q8NEP3 725 aa16.64■□□□□ 0.25
COL9A3-204ENST00000463487 TRMT10AQ8TBZ6 339 aaKnown RBP16.64■□□□□ 0.25
COL9A3-204ENST00000463487 RPL3LQ92901 407 aaKnown RBP16.64■□□□□ 0.25
COL9A3-204ENST00000463487 OR51I2Q9H344 312 aa16.64■□□□□ 0.25
COL9A3-204ENST00000463487 ZCCHC4Q9H5U6 513 aa16.64■□□□□ 0.25
COL9A3-204ENST00000463487 ZNF665Q9H7R5 613 aa16.64■□□□□ 0.25
COL9A3-204ENST00000463487 MAP1AP78559 2803 aaPredicted RBP16.64■□□□□ 0.25
COL9A3-204ENST00000463487 PNMA8CA0A1B0GUJ8 204 aa16.63■□□□□ 0.25
COL9A3-204ENST00000463487 PQLC2LA1A4F0 135 aa16.63■□□□□ 0.25
COL9A3-204ENST00000463487 J3QT63 122 aa16.63■□□□□ 0.25
COL9A3-204ENST00000463487 LGALS8O00214 317 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms