RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 GNALP38405 381 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 EIF1AXP47813 144 aaKnown RBP8.65□□□□□ -1.03
PTPRD-207ENST00000463477 CSNK1A1P48729 337 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 ZNF121P58317 390 aaPredicted RBP8.65□□□□□ -1.03
PTPRD-207ENST00000463477 RAC1P63000 192 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 ADORA2A-AS1P86434 159 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 EXOSC2Q13868 293 aaKnown RBP8.65□□□□□ -1.03
PTPRD-207ENST00000463477 OPCMLQ14982 345 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 TAF13Q15543 124 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 GRK1Q15835 563 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 MOGAT2Q3SYC2 334 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 CLVS2Q5SYC1 327 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 FAHD2BQ6P2I3 314 aaPredicted RBP8.65□□□□□ -1.03
PTPRD-207ENST00000463477 IDO2Q6ZQW0 420 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 OR5AS1Q8N127 324 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 TMEM123Q8N131 208 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 BPIFB2Q8N4F0 458 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 ZNF808Q8N4W9 903 aaPredicted RBP8.65□□□□□ -1.03
PTPRD-207ENST00000463477 GJC3Q8NFK1 279 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 OR5M1Q8NGP8 315 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 OR51E1Q8TCB6 317 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 FAHD2AQ96GK7 314 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 SLC6A15Q9H2J7 730 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 ASH2LQ9UBL3 628 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 GHRLQ9UBU3 117 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 FOXD3Q9UJU5 478 aaPredicted RBP8.65□□□□□ -1.03
PTPRD-207ENST00000463477 MAB21L2Q9Y586 359 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 FLVCR1Q9Y5Y0 555 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 NCKAP5O14513 1909 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 MEIS3P1A6NDR6 274 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 LEUTXA8MZ59 168 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 AHRRA9YTQ3 701 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 RAMP1O60894 148 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 ACTL6AO96019 429 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 OR4E1P0C645 316 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 PRF1P14222 555 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 NAT1P18440 290 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 CDAP32320 146 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 PTGER4P35408 488 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 GUCA1AP43080 201 aaPredicted RBP8.64□□□□□ -1.03
PTPRD-207ENST00000463477 CX3CR1P49238 355 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 CLDN17P56750 224 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 GMFBP60983 142 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 SEC61A1P61619 476 aaKnown RBP8.64□□□□□ -1.03
PTPRD-207ENST00000463477 PNLIPRP3Q17RR3 467 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 WIPI1Q5MNZ9 446 aaPredicted RBP8.64□□□□□ -1.03
PTPRD-207ENST00000463477 ZNF585AQ6P3V2 769 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 C3P1Q6ZMU1 363 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 MRGPRGQ86SM5 289 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 YRDCQ86U90 279 aaKnown RBP8.64□□□□□ -1.03
PTPRD-207ENST00000463477 OR52B4Q8NGK2 314 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 OR5M9Q8NGP3 310 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 OR13C9Q8NGT0 318 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 OR10R2Q8NGX6 335 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 KCNG3Q8TAE7 436 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 TNFAIP8L1Q8WVP5 186 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 ITLN2Q8WWU7 325 aaPredicted RBP8.64□□□□□ -1.03
PTPRD-207ENST00000463477 DVL3Q92997 716 aaPredicted RBP8.64□□□□□ -1.03
PTPRD-207ENST00000463477 C1orf147Q96MC9 270 aaPredicted RBP8.64□□□□□ -1.03
PTPRD-207ENST00000463477 PIGQQ9BRB3 760 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 DPCDQ9BVM2 203 aaPredicted RBP8.64□□□□□ -1.03
PTPRD-207ENST00000463477 CHIAQ9BZP6 476 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 PRDM14Q9GZV8 571 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 POFUT1Q9H488 388 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 GPR84Q9NQS5 396 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.64□□□□□ -1.03
PTPRD-207ENST00000463477 PLEKHA6Q9Y2H5 1048 aa8.64□□□□□ -1.03
PTPRD-207ENST00000463477 UTP20O75691 2785 aaKnown RBP8.64□□□□□ -1.03
PTPRD-207ENST00000463477 MED12Q93074 2177 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 TMEM235A6NFC5 223 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 L7N2F9 121 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 CLDN1O95832 211 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 CD8AP01732 235 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 CXCL2P19875 107 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 CALCRP30988 508 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 THBS4P35443 961 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 PRKXP51817 358 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 GFRA1P56159 465 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 P2RX3P56373 397 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 H2BFSP57053 126 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 ENDOGQ14249 297 aaKnown RBP8.63□□□□□ -1.03
PTPRD-207ENST00000463477 GK2Q14410 553 aaPredicted RBP8.63□□□□□ -1.03
PTPRD-207ENST00000463477 CDNFQ49AH0 187 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 C4orf46Q504U0 113 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 ACTBL2Q562R1 376 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 RNASE10Q5GAN6 216 aaKnown RBP8.63□□□□□ -1.03
PTPRD-207ENST00000463477 ATPAF1Q5TC12 328 aaPredicted RBP8.63□□□□□ -1.03
PTPRD-207ENST00000463477 AWAT2Q6E213 333 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 RTL6Q6ICC9 239 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 OR10K2Q6IF99 312 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 ABHD12BQ7Z5M8 362 aaPredicted RBP8.63□□□□□ -1.03
PTPRD-207ENST00000463477 SLC25A42Q86VD7 318 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 ANGPTL5Q86XS5 388 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 C12orf45Q8N5I9 185 aaPredicted RBP8.63□□□□□ -1.03
PTPRD-207ENST00000463477 ACBD4Q8NC06 268 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 OR9K2Q8NGE7 335 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 OR13C8Q8NGS7 320 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 OR14K1Q8NGZ2 314 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 OR8S1Q8NH09 359 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 OR14L1PQ8NHC6 308 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms