RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 NAA10P41227 235 aaPredicted RBP16.24■□□□□ 0.19
VARS-221ENST00000463184 SLC15A1P46059 708 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 ENTPD1P49961 510 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 BLVRAP53004 296 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 FAM3AP98173 230 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 TEX30Q5JUR7 227 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 DUX4L9Q6RFH8 374 aaPredicted RBP16.24■□□□□ 0.19
VARS-221ENST00000463184 LYPD4Q6UWN0 246 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 WDR82Q6UXN9 313 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 SLC16A9Q7RTY1 509 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 WDR86Q86TI4 376 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 GALNT4Q8N4A0 578 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 OR51L1Q8NGJ5 315 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 OTULINQ96BN8 352 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 SP140LQ9H930 580 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 MED20Q9H944 212 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 SIRT7Q9NRC8 400 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 DUX4Q9UBX2 424 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 ZNF593O00488 134 aaPredicted RBP16.23■□□□□ 0.19
VARS-221ENST00000463184 NPFFO15130 113 aa16.23■□□□□ 0.19
VARS-221ENST00000463184 TBX1O43435 398 aa16.23■□□□□ 0.19
VARS-221ENST00000463184 RRP9O43818 475 aaKnown RBP16.23■□□□□ 0.19
VARS-221ENST00000463184 GYPBP06028 91 aa16.23■□□□□ 0.19
VARS-221ENST00000463184 SPARCP09486 303 aa16.23■□□□□ 0.19
VARS-221ENST00000463184 CSF1P09603 554 aa16.23■□□□□ 0.19
VARS-221ENST00000463184 CLUP10909 449 aa16.23■□□□□ 0.19
VARS-221ENST00000463184 TGM4P49221 684 aa16.23■□□□□ 0.19
VARS-221ENST00000463184 GRB2P62993 217 aaKnown RBP16.23■□□□□ 0.19
VARS-221ENST00000463184 SLC34A1Q06495 639 aa16.23■□□□□ 0.19
VARS-221ENST00000463184 ZIK1Q3SY52 487 aaPredicted RBP16.23■□□□□ 0.19
VARS-221ENST00000463184 LRRC10Q5BKY1 277 aa16.23■□□□□ 0.19
VARS-221ENST00000463184 ATPAF1Q5TC12 328 aaPredicted RBP16.23■□□□□ 0.19
VARS-221ENST00000463184 LPCAT4Q643R3 524 aa16.23■□□□□ 0.19
VARS-221ENST00000463184 PLBD1Q6P4A8 553 aa16.23■□□□□ 0.19
VARS-221ENST00000463184 CPOQ8IVL8 374 aa16.23■□□□□ 0.19
VARS-221ENST00000463184 PACRGLQ8N7B6 248 aa16.23■□□□□ 0.19
VARS-221ENST00000463184 FAM216BQ8N7L0 139 aa16.23■□□□□ 0.19
VARS-221ENST00000463184 OR5R1Q8NH85 324 aa16.23■□□□□ 0.19
VARS-221ENST00000463184 DCTN5Q9BTE1 182 aa16.23■□□□□ 0.19
VARS-221ENST00000463184 RNASEK-C17orf49H0YIS7 233 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.22■□□□□ 0.19
VARS-221ENST00000463184 PRKYO43930 277 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 GLCEO94923 617 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 PAHP00439 452 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 PEX2P28328 305 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 CX3CR1P49238 355 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 CSNK2BP67870 215 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 EFNB1P98172 346 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 EGR3Q06889 387 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 IKZF1Q13422 519 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 TIGD6Q17RP2 521 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 LRRC36Q1X8D7 754 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 OGFRL1Q5TC84 451 aaPredicted RBP16.22■□□□□ 0.19
VARS-221ENST00000463184 LINC01590Q5TEZ4 76 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 C1orf122Q6ZSJ8 110 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 Q8N7P7 452 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 TCEANCQ8N8B7 351 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 C8orf46Q8TAG6 207 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 SGK3Q96BR1 496 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 REEP6Q96HR9 211 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 HRASLS5Q96KN8 279 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 RDH12Q96NR8 316 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 DNTTIP1Q9H147 329 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 TLNRD1Q9H1K6 362 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 OR51V1Q9H2C8 321 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 TOR3AQ9H497 397 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 FBLN5Q9UBX5 448 aa16.22■□□□□ 0.19
VARS-221ENST00000463184 NKX1-2Q9UD57 310 aaPredicted RBP16.22■□□□□ 0.19
VARS-221ENST00000463184 ANKRD61A6NGH8 418 aa16.21■□□□□ 0.19
VARS-221ENST00000463184 E9PQ18 207 aa16.21■□□□□ 0.19
VARS-221ENST00000463184 CDIPTO14735 213 aa16.21■□□□□ 0.19
VARS-221ENST00000463184 PRODHO43272 600 aa16.21■□□□□ 0.19
VARS-221ENST00000463184 APOC1P02654 83 aa16.21■□□□□ 0.19
VARS-221ENST00000463184 ANXA2P07355 339 aaKnown RBP16.21■□□□□ 0.19
VARS-221ENST00000463184 CFL1P23528 166 aaKnown RBP16.21■□□□□ 0.19
VARS-221ENST00000463184 CDC42P60953 191 aa16.21■□□□□ 0.19
VARS-221ENST00000463184 SLC35D3Q5M8T2 416 aa16.21■□□□□ 0.19
VARS-221ENST00000463184 ZNF511Q8NB15 262 aa16.21■□□□□ 0.19
VARS-221ENST00000463184 OR6K6Q8NGW6 343 aa16.21■□□□□ 0.19
VARS-221ENST00000463184 TMEM163Q8TC26 289 aa16.21■□□□□ 0.19
VARS-221ENST00000463184 TNFRSF14Q92956 283 aa16.21■□□□□ 0.19
VARS-221ENST00000463184 MBOAT4Q96T53 435 aa16.21■□□□□ 0.19
VARS-221ENST00000463184 SMPD3Q9NY59 655 aaPredicted RBP16.21■□□□□ 0.19
VARS-221ENST00000463184 hCG_38984A0A1B0GV85 526 aa16.2■□□□□ 0.18
VARS-221ENST00000463184 MEIOCA2RUB1 952 aa16.2■□□□□ 0.18
VARS-221ENST00000463184 AMY2BP19961 511 aa16.2■□□□□ 0.18
VARS-221ENST00000463184 HSD11B1P28845 292 aa16.2■□□□□ 0.18
VARS-221ENST00000463184 GNALP38405 381 aa16.2■□□□□ 0.18
VARS-221ENST00000463184 UBE2E1P51965 193 aa16.2■□□□□ 0.18
VARS-221ENST00000463184 SNCBQ16143 134 aa16.2■□□□□ 0.18
VARS-221ENST00000463184 KLHL12Q53G59 568 aa16.2■□□□□ 0.18
VARS-221ENST00000463184 STUMQ69YW2 141 aa16.2■□□□□ 0.18
VARS-221ENST00000463184 SLC35E4Q6ICL7 350 aa16.2■□□□□ 0.18
VARS-221ENST00000463184 CSNK2A3Q8NEV1 391 aa16.2■□□□□ 0.18
VARS-221ENST00000463184 OR8J1Q8NGP2 316 aa16.2■□□□□ 0.18
VARS-221ENST00000463184 TRUB1Q8WWH5 349 aaKnown RBP16.2■□□□□ 0.18
VARS-221ENST00000463184 SEH1LQ96EE3 360 aa16.2■□□□□ 0.18
VARS-221ENST00000463184 HAO2Q9NYQ3 351 aa16.2■□□□□ 0.18
VARS-221ENST00000463184 H2AFY2Q9P0M6 372 aaPredicted RBP16.2■□□□□ 0.18
VARS-221ENST00000463184 DNAJB11Q9UBS4 358 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms