RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 TMED4Q7Z7H5 227 aa3.58□□□□□ -1.84
ATP13A3-206ENST00000461660 OR5H2Q8NGV7 314 aa3.58□□□□□ -1.84
ATP13A3-206ENST00000461660 FGFBP3Q8TAT2 258 aa3.58□□□□□ -1.84
ATP13A3-206ENST00000461660 GCDHQ92947 438 aaPredicted RBP3.58□□□□□ -1.84
ATP13A3-206ENST00000461660 SLC25A38Q96DW6 304 aa3.58□□□□□ -1.84
ATP13A3-206ENST00000461660 PIGMQ9H3S5 423 aa3.58□□□□□ -1.84
ATP13A3-206ENST00000461660 KCNK15Q9H427 330 aa3.58□□□□□ -1.84
ATP13A3-206ENST00000461660 OCEL1Q9H607 264 aa3.58□□□□□ -1.84
ATP13A3-206ENST00000461660 ING3Q9NXR8 418 aa3.58□□□□□ -1.84
ATP13A3-206ENST00000461660 ZNF319Q9P2F9 582 aa3.58□□□□□ -1.84
ATP13A3-206ENST00000461660 GLS2Q9UI32 602 aa3.58□□□□□ -1.84
ATP13A3-206ENST00000461660 POLDIP2Q9Y2S7 368 aa3.58□□□□□ -1.84
ATP13A3-206ENST00000461660 RHBDD3Q9Y3P4 386 aa3.58□□□□□ -1.84
ATP13A3-206ENST00000461660 PHF3Q92576 2039 aaKnown RBP3.58□□□□□ -1.84
ATP13A3-206ENST00000461660 DOCK7Q96N67 2140 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 LOC100509620A0A075B734 347 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 FUOMA2VDF0 154 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 MBD3L4A6NDZ8 208 aaPredicted RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 MBD3L3A6NE82 208 aaPredicted RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 MBD3L5A6NJ08 208 aaPredicted RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 OR5B21A6NL26 309 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 C16orf97H3BN30 126 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 SULT1C2O00338 296 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 IL18BPO95998 194 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 GSTP1P09211 210 aaKnown RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 PRF1P14222 555 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 PGAM2P15259 253 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 CCL1P22362 96 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 HLA-DMAP28067 261 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 OTX1P32242 354 aaPredicted RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 HAAOP46952 286 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 IKZF1Q13422 519 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 DYRK1AQ13627 763 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 PPA1Q15181 289 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 GABRA6Q16445 453 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 TAF9Q16594 264 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 C4orf46Q504U0 113 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 ZBTB37Q5TC79 503 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 LIN54Q6MZP7 749 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 RGS7BPQ6MZT1 257 aaPredicted RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 RFPL4BQ6ZWI9 263 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 CPEB3Q8NE35 698 aaKnown RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 OR10R2Q8NGX6 335 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 MBD3L2Q8NHZ7 208 aaPredicted RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 PPP1R14BQ96C90 147 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 CMBLQ96DG6 245 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 SNRNP40Q96DI7 357 aaKnown RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 SCGB3A2Q96PL1 93 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 CMSS1Q9BQ75 279 aaKnown RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 SOX7Q9BT81 388 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 ADAT1Q9BUB4 502 aaKnown RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 BEX2Q9BXY8 128 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 BEX1Q9HBH7 125 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 TUBD1Q9UJT1 453 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 TINAGQ9UJW2 476 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 MPC1Q9Y5U8 109 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 NUBP2Q9Y5Y2 271 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 hCG_38984A0A1B0GV85 526 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 FAM90A27PA6NNH2 459 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 J3QW42 95 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 K7EM74 188 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 SPRY1O43609 319 aaPredicted RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 SRSF10O75494 262 aaKnown RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 GRPP07492 148 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 VSIG8P0DPA2 414 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 ZNF44P15621 663 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 IGFBP3P17936 291 aaPredicted RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 CA6P23280 308 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 SRP9P49458 86 aaKnown RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 GPM6AP51674 278 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 EFNB2P52799 333 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 FAM3AP98173 230 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 IFITM3Q01628 133 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 FOXF2Q12947 444 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 GK2Q14410 553 aaPredicted RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 HLXQ14774 488 aaPredicted RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 ACTBL2Q562R1 376 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 STEAP1BQ6NZ63 245 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 TMEM108Q6UXF1 575 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 GABRG1Q8N1C3 465 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 FBXL14Q8N1E6 418 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 SLC25A40Q8TBP6 338 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 NUDCD2Q8WVJ2 157 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 YIPF5Q969M3 257 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 PTX4Q96A99 478 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 POM121L2Q96KW2 1035 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 GINS4Q9BRT9 223 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 ST6GALNAC5Q9BVH7 336 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 C1QTNF5Q9BXJ0 243 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 OR10A4Q9H209 315 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 SPACA1Q9HBV2 294 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 TMEM100Q9NV29 134 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 DKK4Q9UBT3 224 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 ZNF222Q9UK12 451 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 ZNF221Q9UK13 617 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 RBM7Q9Y580 266 aaKnown RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 V9GYS6 101 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 ANKRD11Q6UB99 2663 aaPredicted RBP3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 MCRIP1C9JLW8 97 aa3.57□□□□□ -1.84
ATP13A3-206ENST00000461660 CCL21O00585 134 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms