RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 ZNF404Q494X3 552 aa17.27■□□□□ 0.36
RPUSD3-210ENST00000460909 CLVS2Q5SYC1 327 aa17.27■□□□□ 0.36
RPUSD3-210ENST00000460909 C6orf141Q5SZD1 244 aa17.27■□□□□ 0.36
RPUSD3-210ENST00000460909 OR2G6Q5TZ20 316 aa17.27■□□□□ 0.36
RPUSD3-210ENST00000460909 FAM166AQ6J272 317 aa17.27■□□□□ 0.36
RPUSD3-210ENST00000460909 MOB3CQ70IA8 216 aa17.27■□□□□ 0.36
RPUSD3-210ENST00000460909 MUC20Q8N307 709 aaPredicted RBP17.27■□□□□ 0.36
RPUSD3-210ENST00000460909 KLHL36Q8N4N3 616 aa17.27■□□□□ 0.36
RPUSD3-210ENST00000460909 SPICQ8N5J4 248 aa17.27■□□□□ 0.36
RPUSD3-210ENST00000460909 ZNF485Q8NCK3 441 aa17.27■□□□□ 0.36
RPUSD3-210ENST00000460909 BPIFB6Q8NFQ5 453 aa17.27■□□□□ 0.36
RPUSD3-210ENST00000460909 OR5A2Q8NGI9 324 aa17.27■□□□□ 0.36
RPUSD3-210ENST00000460909 HIST1H2AAQ96QV6 131 aa17.27■□□□□ 0.36
RPUSD3-210ENST00000460909 TMEM246Q9BRR3 403 aa17.27■□□□□ 0.36
RPUSD3-210ENST00000460909 METTL17Q9H7H0 456 aaPredicted RBP17.27■□□□□ 0.36
RPUSD3-210ENST00000460909 PATZ1Q9HBE1 687 aaKnown RBP17.27■□□□□ 0.36
RPUSD3-210ENST00000460909 UBAP1Q9NZ09 502 aa17.27■□□□□ 0.36
RPUSD3-210ENST00000460909 CDIPTO14735 213 aa17.26■□□□□ 0.35
RPUSD3-210ENST00000460909 GPM6AP51674 278 aa17.26■□□□□ 0.35
RPUSD3-210ENST00000460909 GTF2A1P52655 376 aaPredicted RBP17.26■□□□□ 0.35
RPUSD3-210ENST00000460909 GNG3P63215 75 aa17.26■□□□□ 0.35
RPUSD3-210ENST00000460909 PLCXD3Q63HM9 321 aa17.26■□□□□ 0.35
RPUSD3-210ENST00000460909 XAF1Q6GPH4 301 aa17.26■□□□□ 0.35
RPUSD3-210ENST00000460909 SCCPDHQ8NBX0 429 aa17.26■□□□□ 0.35
RPUSD3-210ENST00000460909 C19orf18Q8NEA5 215 aa17.26■□□□□ 0.35
RPUSD3-210ENST00000460909 OR10AC1Q8NH08 325 aa17.26■□□□□ 0.35
RPUSD3-210ENST00000460909 RPL3LQ92901 407 aaKnown RBP17.26■□□□□ 0.35
RPUSD3-210ENST00000460909 OR51I2Q9H344 312 aa17.26■□□□□ 0.35
RPUSD3-210ENST00000460909 GPR173Q9NS66 373 aa17.26■□□□□ 0.35
RPUSD3-210ENST00000460909 OR5B21A6NL26 309 aa17.25■□□□□ 0.35
RPUSD3-210ENST00000460909 CEACAM18A8MTB9 384 aa17.25■□□□□ 0.35
RPUSD3-210ENST00000460909 ZNF732B4DXR9 585 aa17.25■□□□□ 0.35
RPUSD3-210ENST00000460909 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.25■□□□□ 0.35
RPUSD3-210ENST00000460909 TNFRSF13BO14836 293 aaPredicted RBP17.25■□□□□ 0.35
RPUSD3-210ENST00000460909 ZFPL1O95159 310 aa17.25■□□□□ 0.35
RPUSD3-210ENST00000460909 MSMBP08118 114 aa17.25■□□□□ 0.35
RPUSD3-210ENST00000460909 ZNF12P17014 697 aa17.25■□□□□ 0.35
RPUSD3-210ENST00000460909 EGR1P18146 543 aa17.25■□□□□ 0.35
RPUSD3-210ENST00000460909 MYL12AP19105 171 aa17.25■□□□□ 0.35
RPUSD3-210ENST00000460909 HSPA13P48723 471 aa17.25■□□□□ 0.35
RPUSD3-210ENST00000460909 GBX2P52951 348 aaPredicted RBP17.25■□□□□ 0.35
RPUSD3-210ENST00000460909 AHSA2Q719I0 299 aa17.25■□□□□ 0.35
RPUSD3-210ENST00000460909 OR51A4Q8NGJ6 313 aa17.25■□□□□ 0.35
RPUSD3-210ENST00000460909 RPS4Y2Q8TD47 263 aa17.25■□□□□ 0.35
RPUSD3-210ENST00000460909 HAVCR2Q8TDQ0 301 aa17.25■□□□□ 0.35
RPUSD3-210ENST00000460909 ARHGAP32A7KAX9 2087 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 hCG_1807616A0A1W2PRN6 198 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 ANKRD61A6NGH8 418 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 LGALS8O00214 317 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 SLC1A7O00341 560 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 LALBAP00709 142 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 WNT2P09544 360 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 C21orf33P30042 268 aaPredicted RBP17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 CD80P33681 288 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 VHLP40337 213 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 DVL1P1P54792 670 aaPredicted RBP17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 SEC61A1P61619 476 aaKnown RBP17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 UBE2V2Q15819 145 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 SFRP4Q6FHJ7 346 aaPredicted RBP17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 TMPRSS11AQ6ZMR5 421 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 KCTD8Q6ZWB6 473 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 OR52N1Q8NH53 320 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 LRRC29Q8WV35 223 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 C10orf35Q96D05 121 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 ADAT3Q96EY9 351 aaPredicted RBP17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 CHST5Q9GZS9 411 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 PLEKHA1Q9HB21 404 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 LPAR2Q9HBW0 351 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 TMEM160Q9NX00 188 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 BABAM2Q9NXR7 383 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 HHLA2Q9UM44 414 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 PCDHB10Q9UN67 800 aa17.24■□□□□ 0.35
RPUSD3-210ENST00000460909 PQLC2LA1A4F0 135 aa17.23■□□□□ 0.35
RPUSD3-210ENST00000460909 TMEM212A6NML5 194 aa17.23■□□□□ 0.35
RPUSD3-210ENST00000460909 SRRM5B3KS81 715 aa17.23■□□□□ 0.35
RPUSD3-210ENST00000460909 PLPP2O43688 288 aa17.23■□□□□ 0.35
RPUSD3-210ENST00000460909 HOXB4P17483 251 aaPredicted RBP17.23■□□□□ 0.35
RPUSD3-210ENST00000460909 CCDC58Q4VC31 144 aa17.23■□□□□ 0.35
RPUSD3-210ENST00000460909 TEX36Q5VZQ5 186 aa17.23■□□□□ 0.35
RPUSD3-210ENST00000460909 DCDC5Q6ZRR9 648 aa17.23■□□□□ 0.35
RPUSD3-210ENST00000460909 ZNF676Q8N7Q3 588 aa17.23■□□□□ 0.35
RPUSD3-210ENST00000460909 BOLLQ8N9W6 283 aaKnown RBP17.23■□□□□ 0.35
RPUSD3-210ENST00000460909 DEFB108BQ8NET1 73 aa17.23■□□□□ 0.35
RPUSD3-210ENST00000460909 OR10Z1Q8NGY1 313 aa17.23■□□□□ 0.35
RPUSD3-210ENST00000460909 OR51F2Q8NH61 342 aa17.23■□□□□ 0.35
RPUSD3-210ENST00000460909 TMEM186Q96B77 213 aa17.23■□□□□ 0.35
RPUSD3-210ENST00000460909 PDCD1LG2Q9BQ51 273 aa17.23■□□□□ 0.35
RPUSD3-210ENST00000460909 PAK1IP1Q9NWT1 392 aaPredicted RBP17.23■□□□□ 0.35
RPUSD3-210ENST00000460909 KCNS2Q9ULS6 477 aa17.23■□□□□ 0.35
RPUSD3-210ENST00000460909 SIRT4Q9Y6E7 314 aaPredicted RBP17.23■□□□□ 0.35
RPUSD3-210ENST00000460909 OOEPA6NGQ2 149 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 C3orf80F5H4A9 247 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 OGG1O15527 345 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 RHBDL1O75783 438 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 CCDC159P0C7I6 412 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 CPT2P23786 658 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 ZFP36P26651 326 aaKnown RBP17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 CDK5R1Q15078 307 aa17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 RPL22L1Q6P5R6 122 aaKnown RBP17.22■□□□□ 0.35
RPUSD3-210ENST00000460909 LYPD2Q6UXB3 125 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms