RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 GAMTQ14353 236 aa13.68□□□□□ -0.22
SSR4-206ENST00000460616 SPNS3Q6ZMD2 512 aa13.68□□□□□ -0.22
SSR4-206ENST00000460616 BEND4Q6ZU67 534 aa13.68□□□□□ -0.22
SSR4-206ENST00000460616 RNF144BQ7Z419 303 aa13.68□□□□□ -0.22
SSR4-206ENST00000460616 SEMA6DQ8NFY4 1073 aa13.68□□□□□ -0.22
SSR4-206ENST00000460616 MFSD8Q8NHS3 518 aa13.68□□□□□ -0.22
SSR4-206ENST00000460616 RNASE11Q8TAA1 199 aaKnown RBP13.68□□□□□ -0.22
SSR4-206ENST00000460616 RELTQ969Z4 430 aa13.68□□□□□ -0.22
SSR4-206ENST00000460616 TSACCQ96A04 125 aaPredicted RBP13.68□□□□□ -0.22
SSR4-206ENST00000460616 BSCL2Q96G97 398 aaPredicted RBP13.68□□□□□ -0.22
SSR4-206ENST00000460616 CYYR1Q96J86 154 aa13.68□□□□□ -0.22
SSR4-206ENST00000460616 TWSG1Q9GZX9 223 aa13.68□□□□□ -0.22
SSR4-206ENST00000460616 UCK1Q9HA47 277 aa13.68□□□□□ -0.22
SSR4-206ENST00000460616 BCO1Q9HAY6 547 aa13.68□□□□□ -0.22
SSR4-206ENST00000460616 PRTFDC1Q9NRG1 225 aa13.68□□□□□ -0.22
SSR4-206ENST00000460616 EHFQ9NZC4 300 aa13.68□□□□□ -0.22
SSR4-206ENST00000460616 TUBD1Q9UJT1 453 aa13.68□□□□□ -0.22
SSR4-206ENST00000460616 C14orf166Q9Y224 244 aaKnown RBP13.68□□□□□ -0.22
SSR4-206ENST00000460616 SIT1Q9Y3P8 196 aa13.68□□□□□ -0.22
SSR4-206ENST00000460616 TMED3Q9Y3Q3 217 aa13.68□□□□□ -0.22
SSR4-206ENST00000460616 WDFY4Q6ZS81 3184 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 A8MVM7 634 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 RAMP1O60894 148 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 IFNA21P01568 189 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 RNH1P13489 461 aaKnown RBP13.67□□□□□ -0.22
SSR4-206ENST00000460616 SUCLG1P53597 346 aaKnown RBP13.67□□□□□ -0.22
SSR4-206ENST00000460616 CSNK2A1P68400 391 aaPredicted RBP13.67□□□□□ -0.22
SSR4-206ENST00000460616 SURF2Q15527 256 aaPredicted RBP13.67□□□□□ -0.22
SSR4-206ENST00000460616 SSX2Q16385 188 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 PCK2Q16822 640 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 CSNK2A3Q8NEV1 391 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 KCNG3Q8TAE7 436 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 NTNG2Q96CW9 530 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 ARHGAP5-AS1Q96IT6 56 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 GINS3Q9BRX5 216 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 MRPS28Q9Y2Q9 187 aaKnown RBP13.67□□□□□ -0.22
SSR4-206ENST00000460616 STRAPQ9Y3F4 350 aaKnown RBP13.67□□□□□ -0.22
SSR4-206ENST00000460616 A0A087X0M5 115 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 A0A1B0GX30 115 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 MED19A0JLT2 244 aaPredicted RBP13.67□□□□□ -0.22
SSR4-206ENST00000460616 PPP1R2P9O14990 202 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 HCRTR2O43614 444 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 CDC14BO60729 498 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 MT-ATP6P00846 226 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 TTRP02766 147 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 BCKDHBP21953 392 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 PTGER4P35408 488 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 SLC26A5P58743 744 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 DEFB110Q30KQ9 67 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 DEGS2Q6QHC5 323 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 SLC26A10Q8NG04 563 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 CLDN23Q96B33 292 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 RARRES2Q99969 163 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 GPR61Q9BZJ8 451 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 HRASLS2Q9NWW9 162 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 PRODH2Q9UF12 536 aa13.67□□□□□ -0.22
SSR4-206ENST00000460616 ATXN7L1Q9ULK2 861 aaPredicted RBP13.67□□□□□ -0.22
SSR4-206ENST00000460616 TSTD3H0UI37 97 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 CLDN4O14493 209 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 TERTO14746 1132 aaKnown RBP13.66□□□□□ -0.22
SSR4-206ENST00000460616 HIST1H2BKO60814 126 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 DXOO77932 396 aaKnown RBP13.66□□□□□ -0.22
SSR4-206ENST00000460616 IL33O95760 270 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 NUDT14O95848 222 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 HIST1H2BJP06899 126 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 BTF3P20290 206 aaKnown RBP13.66□□□□□ -0.22
SSR4-206ENST00000460616 HIST1H2BOP23527 126 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 HIST1H2BBP33778 126 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 SNU13P55769 128 aaKnown RBP13.66□□□□□ -0.22
SSR4-206ENST00000460616 HIST1H2BDP58876 126 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 HIST1H2BCP62807 126 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 HIST2H2BEQ16778 126 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 PDZD11Q5EBL8 140 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.66□□□□□ -0.22
SSR4-206ENST00000460616 RLN3Q8WXF3 142 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 HIST1H2BHQ93079 126 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 JSRP1Q96MG2 331 aaPredicted RBP13.66□□□□□ -0.22
SSR4-206ENST00000460616 TGM7Q96PF1 710 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 HIST1H2BNQ99877 126 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 HIST1H2BMQ99879 126 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 SSX3Q99909 188 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 WFDC1Q9HC57 220 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 ZDHHC8Q9ULC8 765 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 ZNF587BE7ETH6 402 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 WISP1O95388 367 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 SERPINA2P20848 420 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 LMO1P25800 156 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 P2RY1P47900 373 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 SLC6A8P48029 635 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 TAS2R46P59540 309 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 FOXK1P85037 733 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 ZNF117Q03924 483 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 UBE2V2Q15819 145 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 GFI1BQ5VTD9 330 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 GGNBP1Q5YKI7 109 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 UNQ6494/PRO21346Q6UXR6 183 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 ARHGEF39Q8N4T4 335 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 TMEM156Q8N614 296 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 CCDC54Q8NEL0 328 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 TSTD1Q8NFU3 115 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms