RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 PRKACGP22612 351 aa18.74■□□□□ 0.59
PTPN4-207ENST00000460162 APOFQ13790 326 aa18.74■□□□□ 0.59
PTPN4-207ENST00000460162 LCN1P1Q5VSP4 162 aa18.74■□□□□ 0.59
PTPN4-207ENST00000460162 OLFML2AQ68BL7 652 aa18.74■□□□□ 0.59
PTPN4-207ENST00000460162 ZNF788Q6ZQV5 615 aa18.74■□□□□ 0.59
PTPN4-207ENST00000460162 TRPM8Q7Z2W7 1104 aa18.74■□□□□ 0.59
PTPN4-207ENST00000460162 PIP4P2Q8N4L2 257 aa18.74■□□□□ 0.59
PTPN4-207ENST00000460162 NPRL2Q8WTW4 380 aa18.74■□□□□ 0.59
PTPN4-207ENST00000460162 HIST1H2AAQ96QV6 131 aa18.74■□□□□ 0.59
PTPN4-207ENST00000460162 FAM206AQ9NX38 181 aa18.74■□□□□ 0.59
PTPN4-207ENST00000460162 CLPSL1A2RUU4 121 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 IGHV4-59P01825 116 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 ATP6V1B1P15313 513 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 IER3P46695 156 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 MAP2K3P46734 347 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 GMFBP60983 142 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 SNAPC1Q16533 368 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 TMEM236Q5W0B7 351 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 PDZD9Q8IXQ8 264 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 OR5T2Q8NGG2 359 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 ANGPTL6Q8NI99 470 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 LRTOMTQ8WZ04 291 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 NRBF2Q96F24 287 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 MED30Q96HR3 178 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 GAFA1Q96PS6 74 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 MROQ9BYG7 248 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 DPAGT1Q9H3H5 408 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 SIRT7Q9NRC8 400 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 PAPOLBQ9NRJ5 636 aaKnown RBP18.73■□□□□ 0.59
PTPN4-207ENST00000460162 SNTG1Q9NSN8 517 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 NLKQ9UBE8 527 aa18.73■□□□□ 0.59
PTPN4-207ENST00000460162 TMEM269A0A1B0GVZ9 245 aa18.72■□□□□ 0.59
PTPN4-207ENST00000460162 SIGLEC5O15389 551 aa18.72■□□□□ 0.59
PTPN4-207ENST00000460162 AKR7A2O43488 359 aa18.72■□□□□ 0.59
PTPN4-207ENST00000460162 GPR137BO60478 399 aa18.72■□□□□ 0.59
PTPN4-207ENST00000460162 FBP1P09467 338 aa18.72■□□□□ 0.59
PTPN4-207ENST00000460162 SELLP14151 372 aa18.72■□□□□ 0.59
PTPN4-207ENST00000460162 GPM6AP51674 278 aa18.72■□□□□ 0.59
PTPN4-207ENST00000460162 GNG3P63215 75 aa18.72■□□□□ 0.59
PTPN4-207ENST00000460162 ROM1Q03395 351 aa18.72■□□□□ 0.59
PTPN4-207ENST00000460162 H1FXQ92522 213 aaKnown RBP18.72■□□□□ 0.59
PTPN4-207ENST00000460162 PRRG3Q9BZD7 231 aa18.72■□□□□ 0.59
PTPN4-207ENST00000460162 SLC25A10Q9UBX3 287 aaPredicted RBP18.72■□□□□ 0.59
PTPN4-207ENST00000460162 POMPQ9Y244 141 aa18.72■□□□□ 0.59
PTPN4-207ENST00000460162 FAM96BQ9Y3D0 163 aa18.72■□□□□ 0.59
PTPN4-207ENST00000460162 TMEM14AQ9Y6G1 99 aa18.72■□□□□ 0.59
PTPN4-207ENST00000460162 CCDC182A6NF36 153 aa18.71■□□□□ 0.59
PTPN4-207ENST00000460162 OR5B21A6NL26 309 aa18.71■□□□□ 0.59
PTPN4-207ENST00000460162 ZNF254O75437 659 aa18.71■□□□□ 0.59
PTPN4-207ENST00000460162 GLRA1P23415 457 aa18.71■□□□□ 0.59
PTPN4-207ENST00000460162 CRISP1P54107 249 aa18.71■□□□□ 0.59
PTPN4-207ENST00000460162 CAV3P56539 151 aa18.71■□□□□ 0.59
PTPN4-207ENST00000460162 DGUOKQ16854 277 aa18.71■□□□□ 0.59
PTPN4-207ENST00000460162 ZNF829Q3KNS6 432 aaPredicted RBP18.71■□□□□ 0.59
PTPN4-207ENST00000460162 CEACAM21Q3KPI0 293 aa18.71■□□□□ 0.59
PTPN4-207ENST00000460162 ZBTB37Q5TC79 503 aa18.71■□□□□ 0.59
PTPN4-207ENST00000460162 COMMD2Q86X83 199 aa18.71■□□□□ 0.59
PTPN4-207ENST00000460162 ASB17Q8WXJ9 295 aa18.71■□□□□ 0.59
PTPN4-207ENST00000460162 TEAD3Q99594 435 aa18.71■□□□□ 0.59
PTPN4-207ENST00000460162 TVP23BQ9NYZ1 205 aa18.71■□□□□ 0.59
PTPN4-207ENST00000460162 ZNRD1Q9P1U0 126 aa18.71■□□□□ 0.59
PTPN4-207ENST00000460162 OR2AT4A6NND4 320 aa18.7■□□□□ 0.58
PTPN4-207ENST00000460162 RNASEK-C17orf49H0YIS7 233 aa18.7■□□□□ 0.58
PTPN4-207ENST00000460162 IGLV3-1P01715 115 aa18.7■□□□□ 0.58
PTPN4-207ENST00000460162 MRPL3P09001 348 aaKnown RBP18.7■□□□□ 0.58
PTPN4-207ENST00000460162 EEF1B2P24534 225 aaKnown RBP18.7■□□□□ 0.58
PTPN4-207ENST00000460162 HCCSP53701 268 aa18.7■□□□□ 0.58
PTPN4-207ENST00000460162 FAHD1Q6P587 224 aa18.7■□□□□ 0.58
PTPN4-207ENST00000460162 BRICD5Q6PL45 260 aa18.7■□□□□ 0.58
PTPN4-207ENST00000460162 GDPGP1Q6ZNW5 385 aa18.7■□□□□ 0.58
PTPN4-207ENST00000460162 C1orf122Q6ZSJ8 110 aa18.7■□□□□ 0.58
PTPN4-207ENST00000460162 ZNF679Q8IYX0 411 aa18.7■□□□□ 0.58
PTPN4-207ENST00000460162 Q8N7P7 452 aa18.7■□□□□ 0.58
PTPN4-207ENST00000460162 OR8B4Q96RC9 309 aa18.7■□□□□ 0.58
PTPN4-207ENST00000460162 CNN2Q99439 309 aaKnown RBP18.7■□□□□ 0.58
PTPN4-207ENST00000460162 CITED1Q99966 193 aa18.7■□□□□ 0.58
PTPN4-207ENST00000460162 PBOV1Q9GZY1 135 aa18.7■□□□□ 0.58
PTPN4-207ENST00000460162 OR51I2Q9H344 312 aa18.7■□□□□ 0.58
PTPN4-207ENST00000460162 M0R1W7 72 aa18.69■□□□□ 0.58
PTPN4-207ENST00000460162 PSMD9O00233 223 aa18.69■□□□□ 0.58
PTPN4-207ENST00000460162 ACAA1P09110 424 aaPredicted RBP18.69■□□□□ 0.58
PTPN4-207ENST00000460162 RIDAP52758 137 aaKnown RBP18.69■□□□□ 0.58
PTPN4-207ENST00000460162 OCLNQ16625 522 aa18.69■□□□□ 0.58
PTPN4-207ENST00000460162 CEP78Q5JTW2 689 aa18.69■□□□□ 0.58
PTPN4-207ENST00000460162 NCR3LG1Q68D85 454 aa18.69■□□□□ 0.58
PTPN4-207ENST00000460162 THAP5Q7Z6K1 395 aa18.69■□□□□ 0.58
PTPN4-207ENST00000460162 SLC7A6OSQ96CW6 309 aaPredicted RBP18.69■□□□□ 0.58
PTPN4-207ENST00000460162 MOB1AQ9H8S9 216 aa18.69■□□□□ 0.58
PTPN4-207ENST00000460162 GPR84Q9NQS5 396 aa18.69■□□□□ 0.58
PTPN4-207ENST00000460162 NUFIP1Q9UHK0 495 aaKnown RBP18.69■□□□□ 0.58
PTPN4-207ENST00000460162 ZNF222Q9UK12 451 aa18.69■□□□□ 0.58
PTPN4-207ENST00000460162 VPREB3Q9UKI3 123 aa18.69■□□□□ 0.58
PTPN4-207ENST00000460162 BTBD17A6NE02 478 aa18.68■□□□□ 0.58
PTPN4-207ENST00000460162 PRR32B1ATL7 298 aa18.68■□□□□ 0.58
PTPN4-207ENST00000460162 ZNF732B4DXR9 585 aa18.68■□□□□ 0.58
PTPN4-207ENST00000460162 NPFFO15130 113 aa18.68■□□□□ 0.58
PTPN4-207ENST00000460162 RHBDL1O75783 438 aa18.68■□□□□ 0.58
PTPN4-207ENST00000460162 DNAJC8O75937 253 aaPredicted RBP18.68■□□□□ 0.58
PTPN4-207ENST00000460162 ESRRGP62508 458 aa18.68■□□□□ 0.58
PTPN4-207ENST00000460162 RIPPLY1Q0D2K3 151 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms