RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 ZNF12P17014 697 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 EGR1P18146 543 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 PITPNBP48739 271 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 ACTA2P62736 377 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 GNG3P63215 75 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 ACTG2P63267 376 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 PAX2Q02962 417 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 RAB40BQ12829 278 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 LRRC36Q1X8D7 754 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 TP53I3Q53FA7 332 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 WDR38Q5JTN6 314 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 OGFRL1Q5TC84 451 aaPredicted RBP14.46□□□□□ -0.09
USP39-208ENST00000455732 ZNF691Q5VV52 312 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 TTC23Q5W5X9 447 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 LPCAT4Q643R3 524 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 FDX2Q6P4F2 183 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 FAM90A1Q86YD7 464 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 PRSS35Q8N3Z0 413 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 C19orf18Q8NEA5 215 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 DEFB108BQ8NET1 73 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 OR5A2Q8NGI9 324 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 C12orf43Q96C57 262 aaKnown RBP14.46□□□□□ -0.09
USP39-208ENST00000455732 MRPL48Q96GC5 212 aaKnown RBP14.46□□□□□ -0.09
USP39-208ENST00000455732 RNF170Q96K19 258 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 MYCBPQ99417 103 aaPredicted RBP14.46□□□□□ -0.09
USP39-208ENST00000455732 INPP5EQ9NRR6 644 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 OR5V1Q9UGF6 321 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 RPL36Q9Y3U8 105 aaKnown RBP14.46□□□□□ -0.09
USP39-208ENST00000455732 LOC105371242A0A075B767 164 aa14.45□□□□□ -0.1
USP39-208ENST00000455732 TRAPPC2LH3BP13 241 aa14.45□□□□□ -0.1
USP39-208ENST00000455732 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.45□□□□□ -0.1
USP39-208ENST00000455732 FADS2O95864 444 aaKnown RBP14.45□□□□□ -0.1
USP39-208ENST00000455732 UBCP0CG48 685 aaKnown RBP14.45□□□□□ -0.1
USP39-208ENST00000455732 MUC1P15941 1255 aaPredicted RBP14.45□□□□□ -0.1
USP39-208ENST00000455732 NPY4RP50391 375 aa14.45□□□□□ -0.1
USP39-208ENST00000455732 GPM6AP51674 278 aa14.45□□□□□ -0.1
USP39-208ENST00000455732 GNB2P62879 340 aa14.45□□□□□ -0.1
USP39-208ENST00000455732 CEP78Q5JTW2 689 aa14.45□□□□□ -0.1
USP39-208ENST00000455732 CLVS2Q5SYC1 327 aa14.45□□□□□ -0.1
USP39-208ENST00000455732 SFRP4Q6FHJ7 346 aaPredicted RBP14.45□□□□□ -0.1
USP39-208ENST00000455732 LYPD2Q6UXB3 125 aa14.45□□□□□ -0.1
USP39-208ENST00000455732 ZNF841Q6ZN19 808 aa14.45□□□□□ -0.1
USP39-208ENST00000455732 KCTD8Q6ZWB6 473 aa14.45□□□□□ -0.1
USP39-208ENST00000455732 C1QL2Q7Z5L3 287 aa14.45□□□□□ -0.1
USP39-208ENST00000455732 BOLLQ8N9W6 283 aaKnown RBP14.45□□□□□ -0.1
USP39-208ENST00000455732 SCCPDHQ8NBX0 429 aa14.45□□□□□ -0.1
USP39-208ENST00000455732 RPL3LQ92901 407 aaKnown RBP14.45□□□□□ -0.1
USP39-208ENST00000455732 DACT3Q96B18 629 aaPredicted RBP14.45□□□□□ -0.1
USP39-208ENST00000455732 OR51I2Q9H344 312 aa14.45□□□□□ -0.1
USP39-208ENST00000455732 MMP26Q9NRE1 261 aa14.45□□□□□ -0.1
USP39-208ENST00000455732 CLN8Q9UBY8 286 aa14.45□□□□□ -0.1
USP39-208ENST00000455732 OPN4Q9UHM6 478 aa14.45□□□□□ -0.1
USP39-208ENST00000455732 INSIG2Q9Y5U4 225 aa14.45□□□□□ -0.1
USP39-208ENST00000455732 ANK2Q01484 3957 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 A0A1B0GVI7 797 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 SYT7O43581 403 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 TCF21O43680 179 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 WBP4O75554 376 aaKnown RBP14.44□□□□□ -0.1
USP39-208ENST00000455732 NRASP01111 189 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 KIR3DL2P43630 455 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 OR12D2P58182 307 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 ADARB1P78563 741 aaKnown RBP14.44□□□□□ -0.1
USP39-208ENST00000455732 SCGB2A2Q13296 93 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 GALEQ14376 348 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 MICBQ29980 383 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 PLCXD3Q63HM9 321 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 WDR25Q64LD2 544 aaPredicted RBP14.44□□□□□ -0.1
USP39-208ENST00000455732 SYS1Q8N2H4 156 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 OR2G2Q8NGZ5 317 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 JAM3Q9BX67 310 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 C7orf69Q9H7B7 122 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 DCLRE1BQ9H816 532 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 AMBNQ9NP70 447 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 KAAG1Q9UBP8 84 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 CTSZQ9UBR2 303 aa14.44□□□□□ -0.1
USP39-208ENST00000455732 IGHV2-70DA0A0C4DH43 119 aa14.43□□□□□ -0.1
USP39-208ENST00000455732 ZNF732B4DXR9 585 aa14.43□□□□□ -0.1
USP39-208ENST00000455732 FSHBP01225 129 aa14.43□□□□□ -0.1
USP39-208ENST00000455732 ADRA2CP18825 462 aa14.43□□□□□ -0.1
USP39-208ENST00000455732 CCR9P51686 369 aa14.43□□□□□ -0.1
USP39-208ENST00000455732 ELF3P78545 371 aaPredicted RBP14.43□□□□□ -0.1
USP39-208ENST00000455732 IL18R1Q13478 541 aa14.43□□□□□ -0.1
USP39-208ENST00000455732 KLHL22Q53GT1 634 aa14.43□□□□□ -0.1
USP39-208ENST00000455732 MOB3CQ70IA8 216 aa14.43□□□□□ -0.1
USP39-208ENST00000455732 SETD9Q8NE22 299 aa14.43□□□□□ -0.1
USP39-208ENST00000455732 CYGBQ8WWM9 190 aa14.43□□□□□ -0.1
USP39-208ENST00000455732 C10orf35Q96D05 121 aa14.43□□□□□ -0.1
USP39-208ENST00000455732 ZNF649Q9BS31 505 aa14.43□□□□□ -0.1
USP39-208ENST00000455732 ALG8Q9BVK2 526 aa14.43□□□□□ -0.1
USP39-208ENST00000455732 ERVK-18Q9QC07 812 aa14.43□□□□□ -0.1
USP39-208ENST00000455732 MYRFQ9Y2G1 1151 aa14.43□□□□□ -0.1
USP39-208ENST00000455732 LOC107986453A0A1B0GWG9 222 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 ADAM20O43506 726 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 CLIC3O95833 236 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 GYPAP02724 150 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 ISG15P05161 165 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 PPIAL4GP0DN37 164 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 PAX8Q06710 450 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 MRPL28Q13084 256 aaKnown RBP14.42□□□□□ -0.1
USP39-208ENST00000455732 ODF4Q2M2E3 257 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms