RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 AQP11Q8NBQ7 271 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR8B12Q8NGG6 310 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR2T4Q8NH00 348 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ANGPTL6Q8NI99 470 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 C8orf46Q8TAG6 207 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PIFOQ8TCI5 191 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SPSB4Q96A44 273 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SGK3Q96BR1 496 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PGAM5Q96HS1 289 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DDOQ99489 341 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 KCNJ15Q99712 375 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ABHD6Q9BV23 337 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 RTL8AQ9BWD3 113 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CDCA4Q9BXL8 241 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 NPFFR1Q9GZQ6 430 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TLNRD1Q9H1K6 362 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DCAF13Q9NV06 445 aaKnown RBP4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 NLKQ9UBE8 527 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ABCD2Q9UBJ2 740 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 FBLN5Q9UBX5 448 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZNF222Q9UK12 451 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CAB39Q9Y376 341 aaPredicted RBP4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 RRP15Q9Y3B9 282 aaKnown RBP4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 MAB21L2Q9Y586 359 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 LYVE1Q9Y5Y7 322 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DSCAML1Q8TD84 2053 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ANXA2P2A6NMY6 339 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PRR32B1ATL7 298 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 H3BSH0 61 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 M0R1W7 72 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ATP8B1O43520 1251 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CCDC159P0C7I6 412 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PSG2P11465 335 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 FAHP16930 419 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GLRA1P23415 457 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CD24P25063 80 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DCTDP32321 178 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GRK5P34947 590 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OPRL1P41146 370 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TGM4P49221 684 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GYS2P54840 703 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 KRTAP10-11P60412 298 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ARSJQ5FYB0 599 aaPredicted RBP4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 VAX1Q5SQQ9 334 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 LINC01590Q5TEZ4 76 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GLYATQ6IB77 296 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 HAGHLQ6PII5 290 aaPredicted RBP4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CYP2R1Q6VVX0 501 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZNF788Q6ZQV5 615 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CCDC121Q6ZUS5 278 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 REC114Q7Z4M0 266 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 COMMD2Q86X83 199 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CD177Q8N6Q3 437 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SPERTQ8NA61 448 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PLPP7Q8NBV4 271 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR4C15Q8NGM1 316 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 BCAS4Q8TDM0 211 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 WIPF2Q8TF74 440 aaPredicted RBP4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR5P3Q8WZ94 311 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PIGCQ92535 297 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 C12orf43Q96C57 262 aaKnown RBP4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DMRTB1Q96MA1 342 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 INTS14Q96SY0 518 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 MICU1Q9BPX6 476 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TSSK6Q9BXA6 273 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 NMNAT2Q9BZQ4 307 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 FAM107BQ9H098 131 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OPA3Q9H6K4 179 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 RNPEPL1Q9HAU8 725 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SPAG4Q9NPE6 437 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SAMD4AQ9UPU9 718 aaKnown RBP4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 U3KQV3 271 aa4.84□□□□□ -1.63
HLA-DPA3-207ENST00000454398 STARD9Q9P2P6 4700 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 FAM172BPA6NC97 362 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 A6NIN4 97 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 RIIAD1A6NNX1 92 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ZNF732B4DXR9 585 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 M0R129 80 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 SYNGR1O43759 233 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ARG1P05089 322 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 FABP3P05413 133 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 MRPL3P09001 348 aaKnown RBP4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ACAA1P09110 424 aaPredicted RBP4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PF4V1P10720 104 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 CD33P20138 364 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 FMO3P31513 532 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 KIR2DS4P43632 304 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PSMA6P60900 246 aaKnown RBP4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 RPL31P62899 125 aaKnown RBP4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 BLCAPP62952 87 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 GRB2P62993 217 aaKnown RBP4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 IL5RAQ01344 420 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 MFGE8Q08431 387 aaPredicted RBP4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 MZT1Q08AG7 82 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ACSM1Q08AH1 577 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 TSPAN31Q12999 210 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 BLMHQ13867 455 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 SSX2Q16385 188 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 TCTEX1D4Q5JR98 221 aa4.83□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PLCXD3Q63HM9 321 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms