RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 NARFLQ9H6Q4 476 aa12.04□□□□□ -0.48
COL3A1-203ENST00000450867 PATZ1Q9HBE1 687 aaKnown RBP12.04□□□□□ -0.48
COL3A1-203ENST00000450867 C1orf123Q9NWV4 160 aa12.04□□□□□ -0.48
COL3A1-203ENST00000450867 POLR3KQ9Y2Y1 108 aaPredicted RBP12.04□□□□□ -0.48
COL3A1-203ENST00000450867 JMJD1CQ15652 2540 aa12.04□□□□□ -0.48
COL3A1-203ENST00000450867 PPIAL4EA0A075B759 164 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 ISPDA4D126 451 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 TMEM212A6NML5 194 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 A8MV72 311 aaPredicted RBP12.03□□□□□ -0.48
COL3A1-203ENST00000450867 A8MXK9 166 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 SRRM5B3KS81 715 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 E9PI62 339 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 PPIAL4DF5H284 164 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 LGALS8O00214 317 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 TNFRSF13BO14836 293 aaPredicted RBP12.03□□□□□ -0.48
COL3A1-203ENST00000450867 NRASP01111 189 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 GRPP07492 148 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 CCDC159P0C7I6 412 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 PPIAL4FP0DN26 164 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 MYL12AP19105 171 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 GBX2P52951 348 aaPredicted RBP12.03□□□□□ -0.48
COL3A1-203ENST00000450867 DVL1P1P54792 670 aaPredicted RBP12.03□□□□□ -0.48
COL3A1-203ENST00000450867 MED21Q13503 144 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 TEX36Q5VZQ5 186 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 FAM166AQ6J272 317 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 TMPRSS11AQ6ZMR5 421 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 ZNF826PQ6ZT77 177 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 Q71RC1 249 aaPredicted RBP12.03□□□□□ -0.48
COL3A1-203ENST00000450867 KLHL36Q8N4N3 616 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 PP6455Q8WZ26 134 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 RNF170Q96K19 258 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 TECTBQ96PL2 329 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 HIST1H2AAQ96QV6 131 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 TMEM246Q9BRR3 403 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 OR51I2Q9H344 312 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 TRIM36Q9NQ86 728 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 HHLA2Q9UM44 414 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 PPIAL4AQ9Y536 164 aa12.03□□□□□ -0.48
COL3A1-203ENST00000450867 PPIAL4CA0A0B4J2A2 164 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 PQLC2LA1A4F0 135 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 ANKRD61A6NGH8 418 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 A6NLC8 198 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 CEACAM18A8MTB9 384 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.02□□□□□ -0.49
COL3A1-203ENST00000450867 SLC1A7O00341 560 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 ZFPL1O95159 310 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 TGFAP01135 160 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 MSMBP08118 114 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 GPM6AP51674 278 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 ODF4Q2M2E3 257 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 FAM201AQ5SY85 155 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 PLCXD3Q63HM9 321 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 RPL22L1Q6P5R6 122 aaKnown RBP12.02□□□□□ -0.49
COL3A1-203ENST00000450867 DCDC5Q6ZRR9 648 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 UTS2BQ765I0 119 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 RDH10Q8IZV5 341 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 SCCPDHQ8NBX0 429 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 BPIFB6Q8NFQ5 453 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 OR51F2Q8NH61 342 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 PLEKHA1Q9HB21 404 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 YAE1D1Q9NRH1 226 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 MIOXQ9UGB7 285 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 CLEC2DQ9UHP7 191 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 RAB26Q9ULW5 256 aa12.02□□□□□ -0.49
COL3A1-203ENST00000450867 TRAV20A0A0B4J274 112 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 ZNF732B4DXR9 585 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 INAFM1C9JVW0 142 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 CDIPTO14735 213 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 OGG1O15527 345 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 NDUFA2O43678 99 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 LMX1BO60663 402 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 GATBO75879 557 aaKnown RBP12.01□□□□□ -0.49
COL3A1-203ENST00000450867 WNT2P09544 360 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 MUC1P15941 1255 aaPredicted RBP12.01□□□□□ -0.49
COL3A1-203ENST00000450867 MPZP25189 248 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 SLC35A2P78381 396 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 CDK5R1Q15078 307 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 KCNJ8Q15842 424 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 CEP78Q5JTW2 689 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 OR2G6Q5TZ20 316 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 MOB3CQ70IA8 216 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 AHSA2Q719I0 299 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 ZNF676Q8N7Q3 588 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 OR10AC1Q8NH08 325 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 LRRC29Q8WV35 223 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 CDCA4Q9BXL8 241 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 DUSP21Q9H596 190 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 BABAM2Q9NXR7 383 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 KCNS2Q9ULS6 477 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 LRCH1Q9Y2L9 728 aa12.01□□□□□ -0.49
COL3A1-203ENST00000450867 TRAV38-1A0A0B4J264 116 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 OOEPA6NGQ2 149 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 LALBAP00709 142 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 CDK1P06493 297 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 ACAA1P09110 424 aaPredicted RBP12□□□□□ -0.49
COL3A1-203ENST00000450867 EGR1P18146 543 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 PCMT1P22061 227 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 C21orf33P30042 268 aaPredicted RBP12□□□□□ -0.49
COL3A1-203ENST00000450867 CD80P33681 288 aa12□□□□□ -0.49
COL3A1-203ENST00000450867 GTF2A1P52655 376 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms